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Protein Overview: RGAPX_ARATH

General Information:
Name(s) found: RGAPX_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|22136944|gb|AAM91816.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18424478|ref|NP_568935.1| small G protein family protein / RhoGAP family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|172046652|sp|Q3E875.2|RGAP1_ARATH RecName: Full=Uncharacterized Rho GTPase-activating protein At5g61530 [NCBI NR]
  • gi|15028203|gb|AAK76598.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana GN=At5g61530 PE=1 SV=2 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|15028203|gb|AAK76598.1| unknown protein [Arabidopsis thaliana]gi|18424478|ref|NP_568935.1| small G protein family protein / RhoGAP family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Small G protein family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | small G protein family protein / RhoGAP family protein | chr5:24759856-24761812 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Rho GTPase activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | small G protein family protein / RhoGAP family protein | chr5:24742630-24744586 FORWARD LENGTH=376 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: signal transduction [IEA]
    Molecular Function: Rho GTPase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLISQQWQ ERTSGFFSSS GTKLREAGQT AGSFVGEVAK DAKVNVADVA ERVGSLFKSR  60
   61 WAILQQPATR HAVQEHLITA AATTGTFVRK GITETKEKVS VGKIKVEEAA KKTAQKSKTI 120
  121 LTDIERWQKG VASSDVFGVA IEITVQRQES SRPIPLILVK CADYLILTGL NSPNLFKAEG 180
  181 DRKLIQQLVS AYNQDPRASI PEGVNPVDVA ALLKYYLASL PTPLTTFELY NEIKDARSSI 240
  241 HRMRQSLQKL SNVNYNTLEF ITALLLRVSQ KSLLNKMDSH SLAMEMAPVI MWREDNRPES 300
  301 YREYWRRPSR SPKKSNDFET ATPWDLLSDE GEGPDASSSI PLDDIARVDF GAVEVVQCLI 360
  361 EHHNAIFTDA AETVWR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.
    2 View Details [80..376] PSI-BLAST 47.0 Crystal Structure of the Human Beta2-Chimaerin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • enzyme regulator activity
    		•  0.68732227880003 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  0.590837939249671 bayes_pls_golite062009
  • GTPase regulator activity
    		•  0.59070509814251 bayes_pls_golite062009
  • enzyme activator activity
    		•  0.53004209819211 bayes_pls_golite062009
  • GTPase activator activity
    		•  0.528693496432149 bayes_pls_golite062009
  • small GTPase regulator activity
    		•  0.10243777232979 bayes_pls_golite062009
  • Ras GTPase activator activity
    		•  0.0454578418356197 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle