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Protein Overview: Y4919_ARATH

General Information:
Name(s) found: Y4919_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75248513|sp|Q8VZ67.1|Y4919_ARATH RecName: Full=Uncharacterized zinc finger CCHC domain-containing protein At4g19190 [NCBI NR]
  • gi|22328791|ref|NP_193654.2| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22136744|gb|AAM91691.1| putative putatative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17528964|gb|AAL38692.1| putative putatative protein [Arabidopsis thaliana] [NCBI NR]
  • Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana GN=At4g19190 PE=2 SV=1 [Swiss-Prot]
  • putative putatative protein [Arabidopsis thaliana]gi|17528964|gb|AAL38692.1| putative putatative protein [Arabidopsis thaliana]gi|22328791|ref|NP_193654.2| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | zinc knuckle (CCHC-type) family protein | chr4:10493334-10495980 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative putatative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | zinc knuckle (CCHC-type) family protein | chr4:10493323-10495969 FORWARD LENGTH=595 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 595 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA][ISS]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGEGEGSGI RLSKRFAGGK VTGGSLEVDY KTKSGTAWSH SFLNQKPWHP LSYPNQRRKW  60
   61 IAEQTHAQHD RRAEEVAREF AQEQEFFKQA ALISKKEREK IETMKAVSFM YVRPPGYDPE 120
  121 SAKAAEYKDE KHKGQGSSTQ DPVADDNVGS RPEESQGGGE RTQERKKPRP KDVFGRALPT 180
  181 EEEFEVLKNA PRMETGIPGR VKPFAVEVRN VKCLRCGNFG HQSGDRDCPL KDAVMPNEEL 240
  241 RLKRDDPLTA IIAHTDPSEP LKWELKQKPG LSPPRGGFDP DDPNQQIVAE DIFDEYGGFL 300
  301 EGSIPIEILK SMSSDKKRKS KKNKRHKKHS SRTVEETDES STGSEDSREK RGSKKRKKLK 360
  361 KKSKKQYDSD SLSFEGSGSD SYRLSRRRHT KHVDPSASLK SEVYHQGNSH REKHYYDEKH 420
  421 QKRKEIVDRP SASSDDSDYY RSNSSRKKRS EDDYKSHHRE RKQVHSNDPV SEKSQKQHYS 480
  481 ESGKIQRVEK EHRYDERRHR YVDMESENRN RSEKKPRYDD RDSEKHHRSV KGKEKHVYEA 540
  541 SDDPEEFSDR YRSTKKTESD SESNRRSRKK KHELSSEEEE GESRKHRYST NRRRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..423] PSI-BLAST 6.39794 Heavy meromyosin subfragment
    2 View Details [424..595] MSA 1.200995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle