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Protein Overview: TLP5_ARATH

General Information:
Name(s) found: TLP5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75249578|sp|Q944S3.1|TLP5_ARATH RecName: Full=Tubby-like F-box protein 5; Short=AtTLP5 [NCBI NR]
  • gi|37542294|gb|AAL03977.1| tubby-like protein 5 [Arabidopsis thaliana] [NCBI NR]
  • gi|21689889|gb|AAM67505.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18400968|ref|NP_564485.1| AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|18176058|gb|AAL59976.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15983382|gb|AAL11559.1|AF424565_1 At1g43640/T10P12_16 [Arabidopsis thaliana] [NCBI NR]
  • Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|18176058|gb|AAL59976.1| unknown protein [Arabidopsis thaliana]gi|15983382|gb|AAL11559.1| At1g43640/T10P12_16 [Arabidopsis thaliana]gi|37542294|gb|AAL03977.1| tubby-like protein 5 [Arabidopsis thaliana]gi|184009 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 F-box family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtTLP5 | AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor | chr1:16442059-16443693 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g43640/T10P12_16 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • tubby-like protein 5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AtTLP5, TLP5 | tubby like protein 5 | chr1:16439619-16441253 REVERSE LENGTH=429 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]
    phosphoric diester hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLSIVRDV RDTVGSFSRR SFDVRVSNGT THQRSKSHGV EAHIEDLIVI KNTRWANLPA  60
   61 ALLRDVMKKL DESESTWPAR KQVVACAGVC KTWRLMCKDI VKSPEFSGKL TFPVSLKQPG 120
  121 PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI 180
  181 SRSSSTYIGK LKSNFLGTKF IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI 240
  241 AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV 300
  301 NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ 360
  361 PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM FTMDYRYPLS AFQAFAISLS 420
  421 TFDTKLACE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] FFAS03 1.85 No description for 2e31A was found.
    2 View Details [107..429] PSI-BLAST 107.0 Transcriptional factor tubby, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle