YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|22329629, gi|...

General Information:
Name(s) found: gi|41619032 [NCBI NR]
gi|22329629 [NCBI NR]
gi|21689877 [NCBI NR]
gi|19347780 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|41619032|gb|AAS10007.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|22329629|ref|NP_564025.2| TRFL3 (TRF-LIKE 3); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|21689877|gb|AAM67499.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19347780|gb|AAL86341.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|19347780|gb|AAL86341.1| unknown protein [Arabidopsis thaliana]gi|22329629|ref|NP_564025.2| myb family transcription factor [Arabidopsis thaliana]gi|41619032|gb|AAS10007.1| MYB transcription factor [Arabidopsis t [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TRFL3 | TRFL3 (TRF-LIKE 3); DNA binding / transcription factor | chr1:5999512-6002539 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TRFL3 (TRF-LIKE 3); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546 FORWARD LENGTH=604 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • MYB transcription factor OS=Arabidopsis thaliana GN=TRFL3 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4I7K3, MYB transcription factor OS=Arabidopsis thaliana GN=TRFL3 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 604 amino acids

    Gene Ontology:
    Cellular Component: cytosolic ribosome [IDA]
    Biological Process: regulation of transcription [IEA]
    Molecular Function: DNA binding [IEA][ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGNVKDYGE TFQDSIFQTR NGSLSSTNQI GNPVTYKLVR VAGDGSLVPA TDEEMLEVKN  60
   61 LLEKNEQDMP VLPDPIQTEE YIPDEGSPSQ FLQLENFEGF FQSETAGPYT ENLNSRHESK 120
  121 EELMNGSQML FVLPDTKFQI STELSGNVEL VPSKVLLQEP ILFSSNGCSI NQSTDVLNAT 180
  181 ASPKEPALST AASKPDFSRV PGEISLANLS IKELQETFRA TFGRETTSKD KRWLKRRIKM 240
  241 GLINSCVVPT TTLTINDSKL IGGDQDAIDA FSKGTVDEET ATESIDTPAS PDGIKGHSND 300
  301 FGHSPVETFV DHYSGNEDFE GEDGSAKRVR KPTRRYIEET NEKQQIDGSM IPSKDPSSIQ 360
  361 AVSSEGRVVV TRMVSLAGSR IQVPYVSHVR RSRPRENIMA LGEFRSKSWE VKAAPEEGNL 420
  421 NLSPPQLSND VNRVPGVKSA SRCVQKESDK DHLKPIFTDV DQEMMEPELL DSSGDSSDDN 480
  481 FVDAPITQSA SGRKLHRAWT ISEVEKLVEG VSKYGVGKWT EIKKLSFSPY THRTTVDLKD 540
  541 KWRNLQKASS SNRMEGGLKK HGSMAIPTHI MLQVRELAQK QSPISRVVSK ARVVKRSRSR 600
  601 NGFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] deduced N/A No confident structure predictions are available.
    2 View Details [87..287] deduced N/A No confident structure predictions are available.
    3 View Details [288..433] deduced N/A No confident structure predictions are available.
    4 View Details [434..604] PSI-BLAST 42.221849 c-Myb, DNA-binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle