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Protein Overview: gi|21281233, gi|...

General Information:
Name(s) found: gi|4115915 [NCBI NR]
gi|21281233 [NCBI NR]
gi|18413362 [NCBI NR]
gi|15293099 [NCBI NR]
Description(s) found:
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  • gi|4115915|gb|AAD03426.1| contains similarity to Helix pomatia br-1 protein (GB: X96994) [Arabidopsis thaliana] [NCBI NR]
  • gi|21281233|gb|AAM45035.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18413362|ref|NP_567364.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15293099|gb|AAK93660.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|15293099|gb|AAK93660.1| unknown protein [Arabidopsis thaliana]gi|4115915|gb|AAD03426.1| contains similarity to Helix pomatia br-1 protein (GB: X96994) [Arabidopsis thaliana]gi|18413362|ref|NP_567364.1| expressed [nrdb_11152004_Chlamydomonas]
  • | Symbols: | similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G57180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22017.1); contains domain SSF52540 (SSF52540); contains domain PTHR11089 (PTHR11089); contains domain PTHR11089:SF3 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to Helix pomatia br-1 protein (GB: X96994) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G57180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22017.1); contains domain SSF52540 (SSF52540); contains domain PTHR11089 (PTHR11089); contains domain PTHR11089:SF3 (PTHR11089:SF3); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300) | chr4:6564293-6566398 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:6564297-6566402 FORWARD LENGTH=597 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F3H7.11 protein OS=Arabidopsis thaliana GN=F3H7.11 PE=2 SV=1 [ARATH-contam.fasta]
  • BPG2-like protein OS=Arabidopsis thaliana GN=F3H7.11 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKAARELS SSKLKPLFAL HLSSFKSSIP TKPNPSPPSY LNPHHFNNIS KPPFLRFYSS  60
   61 SSSSNLLPLN RDGNYNDTTS ITISVCPGCG VHMQNSNPKH PGFFIKPSTE KQRNDLNLRD 120
  121 LTPISQEPEF IDSIKRGFII EPISSSDLNP RDDEPSDSRP LVCARCHSLR HYGRVKDPTV 180
  181 ENLLPDFDFD HTVGRRLGSA SGARTVVLMV VDASDFDGSF PKRVAKLVSR TIDENNMAWK 240
  241 EGKSGNVPRV VVVVTKIDLL PSSLSPNRFE QWVRLRAREG GLSKITKLHF VSPVKNWGIK 300
  301 DLVEDVAAMA GKRGHVWAVG SQNAGKSTLI NAVGKVVGGK VWHLTEAPVP GTTLGIIRIE 360
  361 GVLPFEAKLF DTPGLLNPHQ ITTRLTREEQ RLVHISKELK PRTYRIKEGY TVHIGGLMRL 420
  421 DIDEASVDSL YVTVWASPYV PLHMGKKENA YKTLEDHFGC RLQPPIGEKR VEELGKWVRK 480
  481 EFRVSGTSWD TSSVDIAVSG LGWFALGLKG DAILGVWTHE GIDVFCRDSL LPQRAHTFED 540
  541 SGFTVSKIVA KADRNFNQIH KEETQKKRKP NKSFSDSVSD RDNSREVSQP SDILPTM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 19.30103 Probable GTPase YlqF
    2 View Details [107..597] PSI-BLAST 72.154902 No description for 2hjgA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle