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Protein Overview: SWI3D_ARATH

General Information:
Name(s) found: SWI3D_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 985 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: DNA binding [IEA][ISS]
    zinc ion binding [IEA]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKRRDSAG TLAFAGSSGD SPASEPMPAP RRRGGGLKRK ANALGGSNFF SSAPSKRMLT  60
   61 REKAMLASFS PVHNGPLTRA RQAPSIMPSA ADGVKSEVLN VAVGADGEKP KEEEERNKAI 120
  121 REWEALEAKI EADFEAIRSR DSNVHVVPNH CGWFSWEKIH PLEERSLPSF FNGKLEGRTS 180
  181 EVYREIRNWI MGKFHSNPNI QIELKDLTEL EVGDSEAKQE VMEFLDYWGL INFHPFPPTD 240
  241 TGSTASDHDD LGDKESLLNS LYRFQVDEAC PPLVHKPRFT AQATPSGLFP DPMAADELLK 300
  301 QEGPAVEYHC NSCSADCSRK RYHCPKQADF DLCTECFNSG KFSSDMSSSD FILMEPAEAP 360
  361 GVGSGKWTDQ ETLLLLEALE IFKENWNEIA EHVATKTKAQ CMLHFLQMPI EDAFLDQIDY 420
  421 KDPISKDTTD LAVSKDDNSV LKDAPEEAEN KKRVDEDETM KEVPEPEDGN EEKVSQESSK 480
  481 PGDASEETNE MEAEQKTPKL ETAIEERCKD EADENIALKA LTEAFEDVGH SSTPEASFSF 540
  541 ADLGNPVMGL AAFLVRLAGS DVATASARAS IKSLHSNSGM LLATRHCYIL EDPPDNKKDP 600
  601 TKSKSCSADA EGNDDNSHKD DQPEEKSKKA EEVSLNSDDR EMPDTDTGKE TQDSVSEEKQ 660
  661 PGSRTENSTT KLDAVQEKRS SKPVTTDNSE KPVDIICPSQ DKCSGKELQE PLKDGNKLSS 720
  721 ENKDASQSTV SQSAADASQP EASRDVEMKD TLQSEKDPED VVKTVGEKVQ LAKEEGANDV 780
  781 LSTPDKSVSQ QPIGSASAPE NGTAGGNPNI EGKKEKDICE GTKDKYNIEK LKRAAISAIS 840
  841 AAAVKAKNLA KQEEDQIRQL SGSLIEKQLH KLEAKLSIFN EAESLTMRVR EQLERSRQRL 900
  901 YHERAQIIAA RLGVPPSMSS KASLPTNRIA ANFANVAQRP PMGMAFPRPP MPRPPGFPVP 960
  961 GSFVAATTMT GSSDPSPGSD NVSSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..239] Pfam 13.537602 No description for PF04433.9 was found. No confident structure predictions are available.
    3 View Details [240..438] deduced N/A No confident structure predictions are available.
    4 View Details [439..542] deduced N/A No confident structure predictions are available.
    5 View Details [543..617] deduced N/A No confident structure predictions are available.
    6 View Details [618..745] deduced N/A No confident structure predictions are available.
    7 View Details [746..985] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle