YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|18377676, gi|...

General Information:
Name(s) found: gi|41619080 [NCBI NR]
gi|30680387 [NCBI NR]
gi|20259091 [NCBI NR]
gi|18377676 [NCBI NR]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • gi|41619080|gb|AAS10019.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|30680387|ref|NP_196031.2| DNA topoisomerase II family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20259091|gb|AAM14261.1| putative DNA gyrase subunit B [Arabidopsis thaliana] [NCBI NR]
  • gi|18377676|gb|AAL66988.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 546 amino acids

    Gene Ontology:
    Cellular Component: chromosome [IEA]
    Biological Process: DNA topological change [IEA][ISS]
    DNA metabolic process [ISS]
    Molecular Function: ATP binding [IEA][ISS]
    DNA binding [IEA][ISS]
    DNA topoisomerase (ATP-hydrolyzing) activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSGTVKRVS PLQDIKLRVQ ITVSLEMEDN DPNKEYLYAK GLSEFVTWLN ADKKPLHDVL  60
   61 GFRKEINGTT INIALQWCVD GYSNKILGYA NGIRTMDGGT YIDGVKASIT RTLNSLVEKS 120
  121 KLVEDKDIIF TEEHVMEGLT CIVSVIVPKP EFEGQTQRLG NPNVREIVDQ SVQECLMESF 180
  181 ELHPDVFESI MSKSYNAYKT DLAVKRARDV YSSESVAMVC AIESIPMKLT NSSSETSETF 240
  241 IGRGVSSGGA AKHDSDRCFK NKRTWEQPWS DDAVSTAPGE SSENTSGSSF EKKSKKPKSS 300
  301 VSSSHLCFSS RQSADDANSP SPKDVSNKTP KDVTHGSNKD VSNKTSKDVI THGSNKTRPA 360
  361 IPIGPRFQAE IPVWIAPTKK GKFYGSPGDS NTLRWLGTGV WPTYSLKKTV HSKKVGEGRS 420
  421 DSCSCASPRS TNCIKRHKKE AQELLEKEIN RAFSTWEFDQ MGEEIVLKSW TAKEERRFEA 480
  481 LVKKNPLSSS DGFWEFASNA FPQKSKKDLL SYYYNVFLIK RMRLLKSSAA NNIDSDDDHY 540
  541 DDFLAG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 78.09691 DNA gyrase B
    2 View Details [214..546] PSI-BLAST 51.39794 TOPOISOMERASE RESIDUES 410-1202,


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle