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Protein Overview: gi|17529232, gi|...

General Information:
Name(s) found: gi|79313355 [NCBI NR]
gi|22331303 [NCBI NR]
gi|17529232 [NCBI NR]
gi|110742225 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|79313355|ref|NP_001030757.1| catalytic/ glucosylceramidase [Arabidopsis thaliana] [NCBI NR]
  • gi|22331303|ref|NP_189060.2| catalytic/ glucosylceramidase [Arabidopsis thaliana] [NCBI NR]
  • gi|17529232|gb|AAL38843.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110742225|dbj|BAE99039.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 950 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: glucosylceramide catabolic process [IEA]
    sphingolipid metabolic process [IEA]
    Molecular Function: glucosylceramidase activity [IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE  60
   61 AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS QGVPLGGMGS GSISRGFRGE 120
  121 FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN 180
  181 LNGQHSTYHA LFPRAWTIYD GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG 240
  241 KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS 300
  301 ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS 360
  361 ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY GTSPRAALDL VHDALTNYKR 420
  421 WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG 480
  481 NSDGKVGGLD INDQRNDLGN GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL 540
  541 EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK 600
  601 VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV 660
  661 RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC GCLWLAALQA AAAMALQIGD 720
  721 KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL 780
  781 FEESKIRSTM QKIFDFNVMK TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM 840
  841 ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL 900
  901 SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] MSA 2.039977 View MSA. No confident structure predictions are available.
    2 View Details [161..238] deduced N/A No confident structure predictions are available.
    3 View Details [239..950] PSI-BLAST 73.154902 Crystal structure of Vibrio proteolyticus chitobiose phosphorylase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle