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Protein Overview: LA1_ARATH

General Information:
Name(s) found: LA1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • La protein 1 OS=Arabidopsis thaliana GN=LA1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    nucleoplasm [IDA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIPCLTEET AKTVLRQVEF YFSDSNLPID DFLKKTVTES EDGLVSLALI CSFSKMRGYL  60
   61 KLGDSKGDDI PEDTIKAVAD TLRTSSALKI SDDGKKVGRS TELLKLEDLI EQLNARTVAA 120
  121 SPFSYDVKRE DVESFFSQYG KVNSVRMPRH VAESRIFSGV ALVEFPTEED AQNVMKQNLV 180
  181 FAGQELELKP KKEFDNEREK DEVKFANYQP QKGSANQKNG SDHKNNSAYE PDYPKGLIIS 240
  241 FTLKRSAEEG TTEQKSSEEP TDKTMEESET KPADTPDADK ENTGEVQAEG AEDEDDEKEE 300
  301 KGALATHKDN KDVVLREDLK AVFGKFGDVK FVDFKMGSET GYLRFDEPEA SQKARAAAVL 360
  361 ANEGGLAVKN FIAVLEPVIG EAEKEYWTLL RSKDRFDKGG RGGRGGRRGG RFGRKRGSDS 420
  421 PGGRWNKSQK VEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 35.0 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
    2 View Details [202..274] deduced N/A No confident structure predictions are available.
    3 View Details [275..433] PSI-BLAST 10.522879 Solution structure of RRM domain in Nucleolysin TIAR


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle