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Protein Overview: PTR16_ARATH

General Information:
Name(s) found: PTR16_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15293215|gb|AAK93718.1| putative oligopeptide transporter protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15218903|ref|NP_176183.1| proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14334728|gb|AAK59542.1| putative oligopeptide transporter protein [Arabidopsis thaliana] [NCBI NR]
  • Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana GN=NPF4.3 PE=2 SV=1 [Swiss-Prot]
  • putative oligopeptide transporter protein [Arabidopsis thaliana]gi|14334728|gb|AAK59542.1| putative oligopeptide transporter protein [Arabidopsis thaliana]gi|15218903|ref|NP_176183.1| proton-dependent oligopeptide transport (POT) family protein [Arabido [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Proton-dependent oligopeptide transport (POT) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr1:21971892-21975977 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative oligopeptide transporter protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Major facilitator superfamily protein | chr1:21968227-21972312 FORWARD LENGTH=591 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Probable peptide/nitrate transporter At1g59740 OS=Arabidopsis thaliana GN=At1g59740 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: oligopeptide transport [ISS]
    response to nematode [IEP]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM  60
   61 GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL LGGYLSDAFL GSFWTIIIFG 120
  121 FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN 180
  181 MIAHGADQFS QSHPKQSKRL SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA 240
  241 AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND 300
  301 VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF 360
  361 NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM LIFLVPLYDS FLVPFARKLT 420
  421 GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE 480
  481 MFTAVGLIEF FYKQSAKGME SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG 540
  541 ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] PSI-BLAST 8.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [62..415] PSI-BLAST 10.221849 No description for 2gfpA was found.
    3 View Details [416..591] FFAS03 1.48 No description for 2v8nA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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