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Protein Overview: Y3210_ARATH

General Information:
Name(s) found: Y3210_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana GN=At3g22104 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to light stimulus [IEA]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACCSDLEV DINGEQTIFL NKQIICAYSG TLRKLLGKST SSSGNLKVIF NDFPGGAESF  60
   61 EFVSRFCYND GRVAVMPSNV VFLHCAAKFM EVTKVLEQTE KCMEEIRYWA WPEVLLCLKQ 120
  121 CQEVETSPEV DSLAAKLMDA LVEKLCLTIE MSPSSAGSAC SPDSSLFRFS CDSKSTESFK 180
  181 NCSVRLTWWF DEVLVLSSGL VEMFLKLMVL RKFDNLIISR FLFYYQKVKF CSASSHEKRK 240
  241 ILETIIDTLC VLDRSCVPCK SLFAVLRLAL GLNINKSCMN KLEVMIGHQL DQATLDNLLV 300
  301 PSPSKSSHLY YVNLVLRFTK AFLDGARSGL QLKKVSSLID QYIAEVAPDP CLKPSKFLSL 360
  361 ITLVPDSARE SHEDIYRAID MYLEAHTGTT DGEKLNLIRT LSYEKLSGES RAHISRNQKF 420
  421 QAIETLDEQQ QQQQQQQQQK QLILRMEKVE TSGENEKLKE HIEGIQWRVM ELERACLKMQ 480
  481 NQMEVIKKRS KSSSKGSNRS LPKLCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 18.045757 No description for 2nn2A was found.
    2 View Details [149..254] MSA 6.62999 View MSA. Confident ab initio structure predictions are available.
    3 View Details [255..308] MSA 1.246987 View MSA. Confident ab initio structure predictions are available.
    4 View Details [309..506] MSA 1.091982 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

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