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Protein Overview: GACP2_ARATH

General Information:
Name(s) found: GACP2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|18418288|ref|NP_568346.1| tubulin family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14532826|gb|AAK64095.1| putative spindle pole body protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13430652|gb|AAK25948.1|AF360238_1 putative spindle pole body protein [Arabidopsis thaliana] [NCBI NR]
  • Gamma-tubulin complex component 2 OS=Arabidopsis thaliana GN=GCP2 PE=1 SV=1 [Swiss-Prot]
  • putative spindle pole body protein [Arabidopsis thaliana]gi|13430652|gb|AAK25948.1| putative spindle pole body protein [Arabidopsis thaliana]gi|18418288|ref|NP_568346.1| tubulin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Tubulin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | tubulin family protein | chr5:5730653-5736417 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative spindle pole body protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Spc97 / Spc98 family of spindle pole body (SBP) component | chr5:5730651-5736415 FORWARD LENGTH=678 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative spindle pole body protein OS=Arabidopsis thaliana GN=At5g17410 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: microtubule organizing center [IEA]
    spindle pole [IEA]
    Biological Process: microtubule cytoskeleton organization [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSG VEQAIGCYDT  60
   61 PVQELIVIDD LLSALVGIEG RYISIKRFHG KEDSIAFQVD PSMDLALQEL AKRIFPLCEY 120
  121 YLLIDQFVES SSQFKNGLVN HAFAAALRAL LLDYQAMVAQ LEHQFRLGRL SIQGLWFYCQ 180
  181 PMMGSMRALA AVIQQASTKQ FVGSGVLNLL QSQAKAMAGD NSVRSLLEKM TECASNAYLS 240
  241 ILERWVYEGI IDDPYGEFFI AENRSLKKES LSQDSTAKYW SQRYSLKDTI PGFLANIAAT 300
  301 ILTTGKYLNV MRECGHNVQV PISERSKLTI FGSNHHYLEC IKAAHEFASI ELVNLIKDKY 360
  361 DLVGRLRSIK HYLLLDQGDF LVHFMDIARE ELNKKVHEIS VEKLQSLLDL ALRTTAAAAD 420
  421 PRHEDLTCCV DRASLLTTLG MHKDTDSNSI EDPMSITGLE TFSLSYKVQW PLSIVISKKA 480
  481 LSKYQLIFRF LFHCKHVERQ LCGAWQIHQG IRSMNSKGTA ILRSSLLCRS MLKFISSLLH 540
  541 YLTFEVLEPN WHVMHDRLQS TRSVDEVIQH HDFFLDKCLR GCLLLLPDVL KKMEKLKSVC 600
  601 LQYAAATQWL ISSSIDINSQ SHPQKTMIRD TTVTESIFNF EREFNSELQS LGPVLSKGSQ 660
  661 AEPYLTHLSQ WILGVSKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] MSA 2.149973 View MSA. No confident structure predictions are available.
    2 View Details [197..379] MSA 3.163994 View MSA. No confident structure predictions are available.
    3 View Details [380..513] MSA 2.194985 View MSA. No confident structure predictions are available.
    4 View Details [514..678] MSA 2.180994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle