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Protein Overview: gi|26453148, gi|...

General Information:
Name(s) found: gi|28950909 [NCBI NR]
gi|26453148 [NCBI NR]
gi|18416327 [NCBI NR]
Description(s) found:
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  • gi|28950909|gb|AAO63378.1| At4g24340 [Arabidopsis thaliana] [NCBI NR]
  • gi|26453148|dbj|BAC43650.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18416327|ref|NP_567699.1| phosphorylase family protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|28950909|gb|AAO63378.1| At4g24340 [Arabidopsis thaliana]gi|18416327|ref|NP_567699.1| phosphorylase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phosphorylase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phosphorylase family protein | chr4:12607485-12609158 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g24340 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Phosphorylase superfamily protein | chr4:12607475-12609148 FORWARD LENGTH=338 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g24340 OS=Arabidopsis thaliana GN=At4g24340/T22A6_170 PE=2 SV=1 [ARATH-contam.fasta]
  • At4g24340 OS=Arabidopsis thaliana GN=At4g24340 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: nucleoside metabolic process [IEA][ISS]
    Molecular Function: catalytic activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMDHNHFL FPLLFIIIIS SLHVLRASTT PSHSHKLKSA TTIRKINRRG PYIGLVTVFE  60
   61 TEEDAFLGSV DFRLDPTHPF LDLSGRRFRI GKIHGKKVVY VRCGIGMVNA AAATQQMIDV 120
  121 FSVKGIVHFG IAGNINNSMS IGDVSIPKQI TNAGLWDWLN PGKAKGNEDV AYLDVGNYNV 180
  181 PQGNNKLGTI GYSYEELYSV SGHINSPKKV FWINTTQEWL HLAADLEKME LLQCVNASLC 240
  241 LPNKPKVVVG LKAATADIFV DNAAYRNFLY DTFGVSSSDM ESSAVAMTCV SNGYPLIVIR 300
  301 GLSDLAGVGD NTVRKFGSLA ATNTAKAVLE FIKKLPPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 42.09691 Purine Nucleoside Phosphorylase M64V mutant

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.65262719489708 bayes_pls_golite062009
  • transferase activity
    		•  0.28862616861946 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.19985276493812 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle