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Protein Overview: gi|241906930, gi...

General Information:
Name(s) found: gi|241906930 [NCBI NR]
gi|241880743 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|241906930|ref|ZP_04791511.1| nitroreductase [Desulfovibrio vulgaris RCH1] [NCBI NR]
  • gi|241880743|gb|EER80189.1| nitroreductase [Desulfovibrio vulgaris RCH1] [NCBI NR]
    • Organism: Desulfovibrio vulgaris RCH1
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFFEVDAQR CKRDDICIAE CPIHIIISDR DSGVPKMRDG AESVCIRCGH CVAVCPHGAV  60
   61 RIEDMPIEAF TPVDKSLAID ARQAEQFLRG RRSIRTFRDT PVPHDQLAQI METVRWAPSA 120
  121 SHKQPVHWVM VETPSAVREM AELVVDWMTE VRKENPELAR RFNVAGLIAG WRKGQDLILR 180
  181 GAPHLAVAWT EPAATWPEVD CAVALTYLEL AAHAHGVGCC WAGYFTYAAN AYGPLREALG 240
  241 LPQDARVCGG QMMGYARFRY RRLPWRKPLA IDWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] PSI-BLAST 8.045757 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I; Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI; Pyruvate-ferredoxin oxidoreductase, PFOR, domain II; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III; Pyruvate-ferredoxin oxidoreductase, PFOR, domain V
    2 View Details [80..274] PSI-BLAST 17.522879 Flavin reductase P (NADPH:FMN oxidoreductase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.858923918006343 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.100797464100664 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.48193963005483 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.480695441264854 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle