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Protein Overview: gi|229678898, gi...

General Information:
Name(s) found: gi|229903128 [NCBI NR]
gi|229678898 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|229903128|ref|ZP_04518241.1| nicotinate phosphoribosyltransferase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229678898|gb|EEO75001.1| nicotinate phosphoribosyltransferase [Yersinia pestis Nepal516] [NCBI NR]
    • Organism: Yersinia pestis Nepal516
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQDASPILT SLLDTDAYKL HMQQAVFHHY RHITVAAEFR CRSDELLGVY ADEIRHQVTL  60
   61 MGQLALTSDE FIYLSSLPFF QDDYLHWLRD FRFKPEQVSV AVHDGKLDIR IAGLWCEVIM 120
  121 WEVPLLAVIS EIVHRRRSTQ VTTDQAVQQL RTKLEQFNAL SADIDITHFK LMDFGTRRRF 180
  181 SREIQHTVVS TLKDEFPYLV GTSNYDLART LALAPVGTQA HEWFQAHQQI SPTLANSQRV 240
  241 ALQVWLDEYP NQLGIALTDC ITMDAFLRDF DLAFANRYQG LRHDSGDPIE WGEKAIAHYE 300
  301 KLGIDPMKKV LVFSDNLDLE KALFLYRHFY QRIKLVFGIG TRLTCDIPDV KPLNIVIKLV 360
  361 ECNDKPVAKL SDSPGKTICQ DPAFVDQLRK AFALPLVKKA S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..401] PSI-BLAST 131.0 Crystal Structure of a Nicotinate Phosphoribosyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinate phosphoribosyltransferase activity
    		•  5.75487746784842 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  4.79136593406808 bayes_pls_golite062009
  • nicotinate-nucleotide diphosphorylase (carboxylating) activity
    		•  3.97201856258863 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  3.41342374351311 bayes_pls_golite062009
  • catalytic activity
    		•  2.59603106157451 bayes_pls_golite062009
  • transferase activity
    		•  1.91642626258277 bayes_pls_golite062009
  • binding
    		•  1.73051405037757 bayes_pls_golite062009
  • protein binding
    		•  0.294646489785198 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle