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Protein Overview: gi|229897980, gi...

General Information:
Name(s) found: gi|229897980 [NCBI NR]
gi|229689021 [NCBI NR]
Description(s) found:
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  • gi|229897980|ref|ZP_04513131.1| excinuclease ABC subunit C [Yersinia pestis biovar Orientalis str. India 195] [NCBI NR]
  • gi|229689021|gb|EEO81086.1| excinuclease ABC subunit C [Yersinia pestis biovar Orientalis str. India 195] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. India 195
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLFDYKEF LKTVTSQPGV YRMYDTAGTV IYVGKAKDLK KRLTSYFRAQ VANRKTETLV  60
   61 KNIAQIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPLIFLSAD EHPRLAVHRG 120
  121 AKHEKGEYFG PFPNSYAVRE TLALLQKLFP VRQCENSVYR NRSRPCLQYQ IGRCSGPCVE 180
  181 GLVSEEEYQR QVDYVRLFLS GKDQQVLTQL ITRMEEASQQ LHFEDAARIR DQIQAVRRVT 240
  241 EQQFVSGDSE DLDVIGVAFD AGLACVHVLF IRLGKVLGSR SYFPKVPAGT ELSEVVQTFV 300
  301 GQFYLQGSQG RTLPGEILLD FTLTEKDLLA SSLSELAGRK IQIQSRPRGD RARYLKLART 360
  361 NASTALITRL SQQSTIHQRM KELAKVLKLD EINRMECFDI SHTMGEQTVA SCVVFDANGP 420
  421 VRSEYRRYNI SGITPGDDYA AMAQVLKRRY GKALDDQKIP DVIFIDGGKG QLSQAFDVFA 480
  481 SLNVPWDKQK PLLVGVAKGS DRKAGLETLF LASEGEGFSL PPDSPALHLI QHIRDDSHNH 540
  541 AITGHRQRRS KVKNTSALEM IEGVGPKRRQ VLLKYMGGLQ PLFNASVEEI AKVPGISQAL 600
  601 AEKIHNALKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] PSI-BLAST 32.522879 Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Bacillus caldotenax
    2 View Details [99..244] PSI-BLAST 11.0 No description for 2d7dA was found.
    3 View Details [245..338] MSA 2.323988 View MSA. No confident structure predictions are available.
    4 View Details [339..610] PSI-BLAST 53.522879 No description for 2nrtA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle