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Protein Overview: BPM1_ARATH

General Information:
Name(s) found: BPM1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79516480|ref|NP_197401.2| ATBPM1 (BTB-POZ and MATH domain 1); protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|27311975|gb|AAO00953.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22531225|gb|AAM97116.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana GN=BPM1 PE=1 SV=1 [Swiss-Prot]
  • putative protein [Arabidopsis thaliana]gi|27311975|gb|AAO00953.1| putative protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Similar to speckle-type POZ protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATBPM1 | ATBPM1 (BTB-POZ AND MATH DOMAIN 1); protein binding | chr5:6342565-6344643 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATBPM1; protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATBPM1, BPM1 | BTB-POZ and MATH domain 1 | chr5:6342563-6344641 FORWARD LENGTH=407 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: cellular response to salt stress [IEP]
    response to osmotic stress [IEP]
    cellular response to water deprivation [IEP]
    Molecular Function: protein binding [IPI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF  60
   61 MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA LFELTLVDQS GNGKHKVHSH 120
  121 FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY 180
  181 NIPVPVSNLG QQLGNLLESG KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN 240
  241 TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL 300
  301 KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE 360
  361 SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR RVKPRLH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..407] PSI-BLAST 9.522879 Crystal structure of HAUSP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle