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Protein Overview: gi|22531140, gi|...

General Information:
Name(s) found: gi|22531140 [NCBI NR]
gi|18418151 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|22531140|gb|AAM97074.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18418151|ref|NP_567912.1| coclaurine N-methyltransferase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: lipid biosynthetic process [IEA]
    Molecular Function: cyclopropane-fatty-acyl-phospholipid synthase activity [IEA]
    (S)-coclaurine-N-methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKIIDVAYG ASVKVGLTLL EMNLLPDIVI RRLTRLLLAG RLRSGYKPTA EMQLSDLLRF  60
   61 VDSIKKMPIA IHTEKPKTQH YELPTAFFEL VLGRNMKYSS CYFSNDSSSL EDAEEAILAL 120
  121 YCERAKVEDG QSVLDIGCGW GSLSLYIARK YSKCKLTGIC NSKTQKAFID EKCRKLGLQN 180
  181 IEIIVADIST FEHEGTYDRI FSIEMFEHMK NYGELLKKIG KWMKEDSLLF VHYFCHKTFA 240
  241 YHFEDVNDDD WITRHFFSGG TMPSADLLLY FQENVSIVDH WLVSGTHYAK TSEEWLKRMD 300
  301 KEIVAVKKIM EVTYGKEEAV KWMVYWRTFF IAVAELFGYN NGEEWMVAHF LFKKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] PSI-BLAST 12.522879 Molecular basis for bacterial class 1 release factor methylation by PrmC
    2 View Details [83..355] PSI-BLAST 35.39794 Structure of the cyclopropane synthase MmaA2 from Mycobacterium tuberculosis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.62377578202456 bayes_pls_golite062009
  • transferase activity
    		•  1.20063885869845 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.14636302691827 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.12602040164126 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.535429947810431 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle