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Protein Overview: AGD11_ARATH

General Information:
Name(s) found: AGD11_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75154127|sp|Q8L7A4.1|AGD11_ARATH RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD11; AltName: Full=Protein ARF-GAP DOMAIN 11; Short=AtAGD11 [NCBI NR]
  • gi|30680493|ref|NP_187451.2| zinc finger and C2 domain protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|25083805|gb|AAN72120.1| putative GTPase-activating protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22531086|gb|AAM97047.1| putative GTPase-activating protein [Arabidopsis thaliana] [NCBI NR]
  • Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1 [Swiss-Prot]
  • putative GTPase-activating protein [Arabidopsis thaliana]gi|25083805|gb|AAN72120.1| putative GTPase-activating protein [Arabidopsis thaliana]gi|30680493|ref|NP_187451.2| zinc finger and C2 domain protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zinc finger and C2 domain protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger and C2 domain protein, putative | chr3:2529548-2531374 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative GTPase-activating protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Calcium-dependent ARF-type GTPase activating protein family | chr3:2529542-2531368 FORWARD LENGTH=385 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of ARF GTPase activity [IEA]
    Molecular Function: zinc ion binding [IEA]
    ARF GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK  60
   61 YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL SVKLDEWTDD QVDMLVGYGG 120
  121 NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT 180
  181 SPPSLCSASH RSTKNRIGHA FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN 240
  241 LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF 300
  301 STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ 360
  361 DISLRLQNVE RGVLEIQLEC LPLTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] PSI-BLAST 22.09691 Solution structure of ArfGap domain from human SMAP1
    2 View Details [160..385] PSI-BLAST 26.39794 Synaptogamin I


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle