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Protein Overview: gi|229344427, gi...

General Information:
Name(s) found: gi|229519738 [NCBI NR]
gi|229344427 [NCBI NR]
Description(s) found:
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  • gi|229519738|ref|ZP_04409181.1| nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific) [Vibrio cholerae RC9] [NCBI NR]
  • gi|229344427|gb|EEO09402.1| nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific) [Vibrio cholerae RC9] [NCBI NR]
    • Organism: Vibrio cholerae RC9
    Length: 200 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIVLATGN QGKVREMADL LSDFGFDVVA QSEFNVPEAA ETGTTFIENA IIKARHAAQI  60
   61 TGLPTIADDS GLEVDYLNGA PGIYSARYAG EHASDGDNLN KLLMAMQDVP DDQRSARFHC 120
  121 VLVLMRHADD PTPIVCHGKW EGKILTAPHG SNGFGYDPIF WVPEENCASA ELEPVRKKQL 180
  181 SHRGKALQKL FKAIEEQRTC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] PSI-BLAST 80.0 Hypothetical protein YggV

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphate diphosphatase activity
    		•  2.4486133651528 bayes_pls_golite062009
  • binding
    		•  1.2828743465361 bayes_pls_golite062009
  • protein binding
    		•  0.121994365068808 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle