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Protein Overview: NADE_VIBCM

General Information:
Name(s) found: NADE_VIBCM [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • NH(3)-dependent NAD(+) synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=nadE PE=3 SV=1 [Swiss-Prot]
    • Organism: Vibrio cholerae M66-2
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHKIREEMR VLPSIDPQFE IERRVAFIKR KLTEARCKSL VLGISGGVDS TTCGRLAQLA  60
   61 VEELNQQHNT TEYQFIAVRL PYGEQKDEDE AQLALSFIRP THSVSVNIKA GVDGLHAASH 120
  121 HALANTGLIP SDPAKVDFIK GNVKARARMV AQYEIAGYVG GLVLGTDHSA ENITGFYTKF 180
  181 GDGACDLAPL FGLNKRQVRL LAKTLGAPEQ LVYKTPTADL EELAPQKADE AALNLTYEQI 240
  241 DDFLEGKAVP AEVSQRLVAI YHATQHKRQP IPTIYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 64.09691 E.coli NAD Synthetase, AMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-nitrogen bonds
    		•  1.9422825865652 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.77152913449838 bayes_pls_golite062009
  • GMP synthase (glutamine-hydrolyzing) activity
    		•  1.08094655947236 bayes_pls_golite062009
  • ligase activity
    		•  1.02544349488516 bayes_pls_golite062009
  • catalytic activity
    		•  0.828867994386867 bayes_pls_golite062009
  • NAD+ synthase activity
    		•  0.693146657234538 bayes_pls_golite062009
  • binding
    		•  0.268276895381766 bayes_pls_golite062009
  • protein binding
    		•  0.0198162482538781 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle