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Protein Overview: gi|229505790, gi...

General Information:
Name(s) found: gi|229505790 [NCBI NR]
gi|229356141 [NCBI NR]
Description(s) found:
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  • gi|229505790|ref|ZP_04395299.1| pyridoxamine 5'-phosphate oxidase [Vibrio cholerae BX 330286] [NCBI NR]
  • gi|229356141|gb|EEO21059.1| pyridoxamine 5'-phosphate oxidase [Vibrio cholerae BX 330286] [NCBI NR]
    • Organism: Vibrio cholerae BX 330286
    Length: 211 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSDIRREY IHGGLRRKDL QANPIDQFNL WLQQAIDANL SDPTAMTVAT VDEHGQPFQR  60
   61 IVLLKNVDDA GFVFYTNLGS RKAQHIAHNN KISLHFPWHP LERQVHITGV AEKLTAMENM 120
  121 KYFMSRPKES QIAAIASHQS SRISARGVLE GKYLELKQKF ANGEIPVPSF WGGYRIRPES 180
  181 LEFWQGGEHR LHDRFLYSRQ DDNWTVDRLA P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] PSI-BLAST 79.69897 Pyridoxine 5'-phoshate oxidase (PNP oxidase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pyridoxamine-phosphate oxidase activity
    		•  3.81533880638523 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.18444956617957 bayes_pls_golite062009
  • catalytic activity
    		•  0.660906721832294 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.0268904833845668 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle