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Protein Overview: gi|226898329, gi...

General Information:
Name(s) found: gi|237707119 [NCBI NR]
gi|226898329 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|237707119|ref|ZP_04537600.1| periplasmic protein [Escherichia sp. 3_2_53FAA] [NCBI NR]
  • gi|226898329|gb|EEH84588.1| periplasmic protein [Escherichia sp. 3_2_53FAA] [NCBI NR]
    • Organism: Escherichia sp. 3_2_53FAA
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKIAITCA LLSSLVASSV WADAASDLKS RLDKVSSFHA SFTQKVTDGS GAAVQEGQGD  60
   61 LWVKRPNLFN WHMTQPDESI LVSDGKTLWF YNPFVEQATA TWLKDATGNT PFMLIARNQS 120
  121 SDWQQYNIKQ NGDDFVLTPK ASNGNLKQFT INVGRDGTIH QFSAVEQDDQ RSSYQLKSQQ 180
  181 NGAVDAAKFT FTPPQGVTVD DQRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] PSI-BLAST 49.39794 Outer-membrane lipoproteins carrier protein LolA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein transporter activity
    		•  2.94733677676109 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  2.80163572604854 bayes_pls_golite062009
  • transporter activity
    		•  1.94557075462337 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.8285077384404 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.57976971135135 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.4723961195197 bayes_pls_golite062009
  • protein binding
    		•  1.38954552030231 bayes_pls_golite062009
  • binding
    		•  1.0696248685847 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle