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Protein Overview: gi|229895935, gi...

General Information:
Name(s) found: gi|229895935 [NCBI NR]
gi|229700858 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|229895935|ref|ZP_04511105.1| lipoate synthase [Yersinia pestis Pestoides A] [NCBI NR]
  • gi|229700858|gb|EEO88887.1| lipoate synthase [Yersinia pestis Pestoides A] [NCBI NR]
    • Organism: Yersinia pestis Pestoides A
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPIQMERG VKYRDADKMA LIPVKNVVTE RQELLRKPEW LKIKLPTDSS RIQGIKAAMR  60
   61 KNGLHSVCEE ASCPNLSECF NHGTATFMIL GAICTRRCPF CDVAHGRPVT PDANEPEKLA 120
  121 QTIQDMGLRY VVITSVDRDD LRDGGAQHFA DCISAIRAKN PTIKIETLVP DFRGRMDRAL 180
  181 DILTATPPDV FNHNLENVPR VYRQVRPGAN YDWSLKLLER FKEAHPDIPT KSGLMVGLGE 240
  241 TNAEIVEVMH DLRRHGVTML TLGQYLQPSR HHLPVQRYVS PAEFDEMKAE AMAMGFTHAA 300
  301 CGPFVRSSYH ADLQAKGMEV K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 45.0 The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • biotin synthase activity
    		•  2.22585029668171 bayes_pls_golite062009
  • radical SAM enzyme activity
    		•  2.08127882819276 bayes_pls_golite062009
  • catalytic activity
    		•  1.85375915825216 bayes_pls_golite062009
  • coproporphyrinogen oxidase activity
    		•  1.27516985221578 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  1.26112752511053 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  0.604275066192139 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  0.35292941647096 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle