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Protein Overview: PS6AB_ARATH

General Information:
Name(s) found: PS6AB_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21700797|gb|AAM70522.1| At1g09100/F7G19_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|215433748|gb|ACJ66733.1| 26S proteasome AAA-ATPase subunit RPT5b [Arabidopsis thaliana] [NCBI NR]
  • gi|15724310|gb|AAL06548.1|AF412095_1 At1g09100/F7G19_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15217431|ref|NP_172384.1| RPT5B (26S proteasome AAA-ATPase subunit RPT5B); ATPase/ calmodulin binding [Arabidopsis thaliana] [NCBI NR]
  • gi|15215788|gb|AAK91439.1| At1g09100/F7G19_2 [Arabidopsis thaliana] [NCBI NR]
  • 26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3 [Swiss-Prot]
  • At1g09100/F7G19_2 [Arabidopsis thaliana]gi|15724310|gb|AAL06548.1| At1g09100/F7G19_2 [Arabidopsis thaliana]gi|15215788|gb|AAK91439.1| At1g09100/F7G19_2 [Arabidopsis thaliana]gi|15217431|ref|NP_172384.1| 26S protease regulatory subunit 6A, putative [Ara [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 26S protease regulatory subunit 6A [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPT5B | RPT5B (26S PROTEASOME AAA-ATPASE SUBUNIT RPT5B); ATPase/ calmodulin binding | chr1:2936677-2939260 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g09100/F7G19_2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATPase/ calmodulin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    plasma membrane [IDA]
    Biological Process: pollen development [IGI]
    embryo sac development [IGI]
    glucose mediated signaling pathway [IMP]
    proteasomal protein catabolic process [IGI]
    Molecular Function: ATPase activity [ISS]
    calmodulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAMAEDTS FEGDQLASMT TDDIGRASRL LANEIRILKE ESQRTNLDLE SVKEKIKENQ  60
   61 EKIKLNKQLP YLVGNIVEIL EMSPEDDAEE DGANIDLDSQ RKGKCVVLKT STRQTIFLPV 120
  121 VGLVDPDTLK PGDLVGVNKD SYLILDTLPS EYDSRVKAME VDEKPTEDYN DIGGLEKQIQ 180
  181 ELVEAIVLPM THKEQFEKLG IRPPKGVLLY GPPGTGKTLM ARACAAQTNA TFLKLAGPQL 240
  241 VQMFIGDGAK LVRDAFLLAK EKSPCIIFID EIDAIGTKRF DSEVSGDREV QRTMLELLNQ 300
  301 LDGFSSDDRI KVIAATNRAD ILDPALMRSG RLDRKIEFPH PTEEARGRIL QIHSRKMNVN 360
  361 ADVNFEELAR STDDFNGAQL KAVCVEAGML ALRRDATEVN HEDFNEGIIQ VQAKKKASLN 420
  421 YYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..423] PSI-BLAST 69.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle