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Protein Overview: gi|29028816, gi|...

General Information:
Name(s) found: gi|30688121 [NCBI NR]
gi|29028816 [NCBI NR]
gi|110743221 [NCBI NR]
Description(s) found:
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  • gi|30688121|ref|NP_194612.2| methyltransferase/ nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
  • gi|29028816|gb|AAO64787.1| At4g28830 [Arabidopsis thaliana] [NCBI NR]
  • gi|110743221|dbj|BAE99501.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • At4g28830 [Arabidopsis thaliana]gi|30688121|ref|NP_194612.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | methyltransferase | chr4:14232496-14233923 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g28830 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:14232490-14233917 FORWARD LENGTH=208 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g28830 OS=Arabidopsis thaliana GN=At4g28830 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: methylation [IEA]
    Molecular Function: nucleic acid binding [IEA]
    methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKQLEGLL GDLEQFSNPK VEFEQYPTGP HIASRMLFTA ENSYGDITDK VVADFGCGCG  60
   61 TLSAAAALLD AASVIGFDID PESLETATLN AEELEVEIDF VQCDITKLEL KGLIVDTVVM 120
  121 NPPFGTRKKG ADMEFLSAAM KVASKAVYSL HKTSTREHIK RAALRDFNAK SAEVICELRY 180
  181 DLPKLYKFHK RKEVDIAVDL WRFEPRQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] PSI-BLAST 24.69897 crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  0.444447673749491 bayes_pls_golite062009
  • catalytic activity
    		•  0.352837241386487 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0533354664784367 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0416815045255102 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle