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Protein Overview: SQD2_ARATH

General Information:
Name(s) found: SQD2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30679163|ref|NP_568085.2| SQD2 (sulfoquinovosyldiacylglycerol 2); UDP-glycosyltransferase/ UDP-sulfoquinovose:DAG sulfoquinovosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] [NCBI NR]
  • gi|28973765|gb|AAO64198.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20302857|gb|AAM18913.1|AF454354_1 sulfolipid synthase [Arabidopsis thaliana] [NCBI NR]
  • Sulfoquinovosyl transferase SQD2 OS=Arabidopsis thaliana GN=SQD2 PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|20302857|gb|AAM18913.1| sulfolipid synthase [Arabidopsis thaliana]gi|30679163|ref|NP_568085.2| UDP-sulfoquinovose:DAG sulfoquinovosyltransferase / sulfolipid synthase (SQD2) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SQD2 | SQD2 (SULFOQUINOVOSYLDIACYLGLYCEROL 2); UDP-sulfoquinovose:DAG sulfoquinovosyltransferase/ transferase, transferring glycosyl groups | chr5:86906-89884 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • sulfolipid synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SQD2 (SULFOQUINOVOSYLDIACYLGLYCEROL 2); UDP-sulfoquinovose:DAG sulfoquinovosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SQD2 | sulfoquinovosyldiacylglycerol 2 | chr5:86907-89885 REVERSE LENGTH=510 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At5g01220 OS=Arabidopsis thaliana GN=SQD2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: glycolipid biosynthetic process [IDA]
    cellular response to phosphate starvation [IMP]
    sulfolipid biosynthetic process [TAS]
    Molecular Function: UDP-glycosyltransferase activity [IDA]
    transferase activity, transferring glycosyl groups [ISS]
    UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLSSINLS IPPHLLPSTT NTCSSSSATS CSPPRSSSFV LHSPLSFGHR RLPISKKSKL  60
   61 RFCGVITKEA VSGSNDMTIT QVREDDESEI DAPLLDPESL SKPRRIALFV EPSPFAYVSG 120
  121 YKNRFQNFIR YLREMGDEVI VVTTHEGVPE EFYGARVIGS RSFPCPYYQK VPLSLALSPR 180
  181 IISEIARFKP DIIHASSPGV MVFGALAIAK MLSVPIVMSY HTHVPVYIPR YTFSWLVKPM 240
  241 WSIIRFLHRA ADLTLVPSAA IGKDLIAAGA TAANQLRLWN KGVDSESFNP RFRSQEMRIR 300
  301 LSNGEPEKPL VIHVGRIGVE KSLELLKSVM DKLPEARIAF IGDGPYKEDL EKLFTGMPAV 360
  361 FTGTLQGDEL SQAYASGDVF VMPSESETLG LVVLEAMSSG LPVVAARAGG IPDIIPEDQE 420
  421 GKTGFLFNPG DVEDCVTKLR TLLHDRETRE IIGKAAREET EKYDWRAATT KIRNEQYSAA 480
  481 IWFWRKKKVH VLGPINWLIK RLFPVPEGNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..510] PSI-BLAST 53.0 No description for 2gejA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.37

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle