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Protein Overview: acr-9

General Information:
Name(s) found: acr-9 / CE37330 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00000048 locus:acr-9 status:Partially_confirmed UniProt:Q18556 protein_id:CAA94206.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 534 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISPVLRLTA LHCVLFHLLT EVHSSADEYR LLADLRHNYD PYERPVANAS EPLVVSVKIY  60
   61 LQQILDVDEK NQVITLVAWI EYQWTDYKLK WDPSEYGGIK DIRIPGNANA IWKPDVLLYN 120
  121 SADENFDSTY PVNYVVSYTG DVLQVPPGIL KLSCKIDITY FPFDDQICHL KFGSWTYSGN 180
  181 FIDLRINGPE GKNISDEGID VQYYVQNGEW NLLAVPARHE TNIFDEQPYP SLFFYLIIQR 240
  241 RTLYYGLNLI IPSFLISLMT VLGFTLPPDA GEKITLEITI LLSVCFFLSM VADMTPPTSE 300
  301 AVPLIGAFFS CCMLVVSASV VFTVLVLNLH NRKPETHEMS PFLRELLLIW LPWLLLMRRP 360
  361 GKTIFNCTHL KAEKAEEKAK QGSIKNGVGP GKPTDSVHPS EGLSLMKNIK LGRQQTIDFE 420
  421 YEFHVQHNHL MPVAPSEMTP RVTYSKVMAE SYVEDVVMTE LNKYMQKACL ELKNISSQTR 480
  481 AMRKKMEEDE RDEQAANDWK FAAMVVDRCC LITFSVFIVV STCGIMFSSP HLIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..339] PSI-BLAST 80.69897 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
    2 View Details [340..534] PSI-BLAST 42.0 Acetylcholine receptor protein, beta chain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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