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Protein Overview: TPR3_ARATH

General Information:
Name(s) found: TPR3_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Topless-related protein 3 OS=Arabidopsis thaliana GN=TPR3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1108 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: primary shoot apical meristem specification [IGI]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF  60
   61 TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD LRVFSTFNEE LYKEITQLLT 120
  121 LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN 180
  181 WQHQLCKNPR PNPDIKTLFT DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP 240
  241 GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN 300
  301 PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL 360
  361 LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA LIAKETPISV TRVAWSPDGN 420
  421 FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV 480
  481 WDVSGRKHFT FEGHDAPVYS ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK 540
  541 WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH 600
  601 FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP 660
  661 AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER GSPVRHSQML NGVDPSKSRI 720
  721 DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW 780
  781 KWVPNEQNPS GKATATVVPQ HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG 840
  841 GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL 900
  901 KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF 960
  961 HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS SAVYACNSQL IYTTFRDGNI1020
 1021 GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE1080
 1081 GKWGMIPPSE AINSPSTTSN QTPEQLQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] deduced N/A No confident structure predictions are available.
    2 View Details [186..375] PSI-BLAST 37.045757 No description for 2hesX was found.
    3 View Details [376..438] PSI-BLAST 4.69897 No description for 2oajA was found.
    4 View Details [439..571] PSI-BLAST 77.69897 No description for 2gnqA was found.
    5 View Details [572..701] deduced N/A No confident structure predictions are available.
    6 View Details [702..793] PSI-BLAST 72.69897 No description for 3dm0A was found.
    7 View Details [794..1108] PSI-BLAST 65.09691 Tup1, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle