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Protein Overview: SPL8_ARATH

General Information:
Name(s) found: SPL8_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|67461535|sp|Q8GXL3.2|SPL8_ARATH RecName: Full=Squamosa promoter-binding-like protein 8 [NCBI NR]
  • gi|5931681|emb|CAB56594.1| squamosa promoter binding protein-like 8 [Arabidopsis thaliana] [NCBI NR]
  • gi|5931679|emb|CAB56593.1| squamosa promoter binding protein-like 8 [Arabidopsis thaliana] [NCBI NR]
  • pir||T52594 squamosa promoter binding protein 8 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22329284|ref|NP_683267.1| SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding [Arabidopsis thaliana] [NCBI NR]
  • Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2 [Swiss-Prot]
  • squamosa promoter binding protein-like 8 [Arabidopsis thaliana]gi|5931679|emb|CAB56593.1| squamosa promoter binding protein-like 8 [Arabidopsis thaliana]gi|25456664|pir||T52594 squamosa promoter binding protein 8 [imported] - Arabidopsis thalianagi|223 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Squamosa-promoter binding-like protein 8 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding | chr1:365625-367149 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • squamosa promoter binding protein-like 8 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Squamosa promoter-binding-like protein 8 [nr-271106-contam.fasta]
  • | Symbols: SPL8 | squamosa promoter binding protein-like 8 | chr1:365625-367149 FORWARD LENGTH=333 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 333 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: microsporogenesis [IMP]
    megasporogenesis [IMP]
    Molecular Function: DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ  60
   61 QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS DPIYHPHSSA PPASLFSYDQ 120
  121 TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA 180
  181 NSLSTPRCQA EGCNADLSHA KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE 240
  241 FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT 300
  301 ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] deduced N/A No confident structure predictions are available.
    2 View Details [172..333] PSI-BLAST 38.154902 Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle