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Protein Overview: ppk28-PA

General Information:
Name(s) found: ppk28-PA / FBpp0074109 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • The gene pickpocket 28 is referred to in FlyBase by the symbol Dmel\ppk28 (CG4805, FBgn0030795). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16700340..16702418. It has the cytological map location 15A9-15A10. It is reported to have molecular function</span>: sodium channel activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: sodium ion transport. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: sodium ion transport [IEA]
    Molecular Function: sodium channel activity [IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLTESRRR QSGSSGCKKD SESDDDENTI CSRAAIKRSV VYYLKNSTLH GLKYIAEESI  60
   61 TIPERIFFGL AFVLVVILSV FFISNVYVKW SASPIIISTS AKQKLTSNMP FPAITICNLN 120
  121 QALLSKVDRI GRTSTNFSLL MGLCDQGGDT TISYIGTWKY FKAILVDVAQ PCEKMLLYCS 180
  181 FGSREEDCSW LFTSILTDDG LCCNFNALHP SYLIRNYSDD VRLETAHPNT RYELIDWTPE 240
  241 KGYARNLPEF YFPRTSGGTG IRMGLTVVLN ASIAEYYCTK SMSVGFKVLV HNPAELPKVS 300
  301 NYGFVVTAGR EARIPIEPVY EDALPTIRSI KKSVRRCLFS DENDLAYYRT YSRKNCELEC 360
  361 EAKLLLRECS CVLYYLPRID PLARVCGPND NQCTDRVQTE IESSLTNLSC ENCWPGCFEL 420
  421 TYRATLSTAS IVSDPRFQAG ENLPEYIFHG PYSNASEISI LHFYYMTNIF RSTTKSEMFG 480
  481 FTEFLSNTGG LLGLFMGFSI FSVIEIFFYI TVRPYCASRT LRQRHKRRLE QLSWLTPIRM 540
  541 PVRRALRRNR GGLLRNPPPP AYSDLQKFRG KLDKPETCKR KLWRTLQVRP VVDRADEELP 600
  601 TYPYLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..535] PSI-BLAST 96.045757 No description for 2qtsA was found.
    2 View Details [536..606] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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