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Protein Overview: ppk28-PB

General Information:
Name(s) found: ppk28-PB / FBpp0099907 [FlyBase]
Description(s) found:
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  • gi|62473788|ref|NP_001014748.1| pickpocket 28, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|61677907|gb|AAX52502.1| pickpocket 28, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|28626412|gb|AAO47378.1| pickpocket 28 long form [Drosophila melanogaster] [NCBI NR]
  • Pickpocket protein 28 OS=Drosophila melanogaster GN=ppk28 PE=1 SV=1 [Swiss-Prot]
  • The gene pickpocket 28 is referred to in FlyBase by the symbol Dmel\ppk28 (CG4805, FBgn0030795). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16700340..16702418. It has the cytological map location 15A9-15A10. It is reported to have molecular function</span>: sodium channel activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: sodium ion transport. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • pickpocket 28 long form [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(16700340..16700585,16700641..16701333,16701396..16701990,16702054..16702418); ID=FBpp0099907; name=ppk28-PB; parent=FBgn0030795,FBtr0100474; dbxref=FlyBase_Annotation_IDs:CG4805-PB,FlyBase:FBpp0099907,GB_protein:AAX52502.1,REFSEQ: [fly-100309-contam.fasta]
  • pickpocket 28 CG4805-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4805-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(16700340..16700585,16700641..16701333,16701396..16701990,16702054..16702418); ID=FBpp0099907; name=ppk28-PB; parent=FBgn0030795,FBtr0100474; dbxref=FlyBase_Annotation_IDs:CG4805-PB,FlyBase:FBpp0099907,GB_protein:AAX52502.1,REFSEQ:NP_001014748,GB_protein:AAX52502; MD5=14974804b24ef237bdd65a71f1a87b83; length=632; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(16700340..16700585,16700641..16701333,16701396..16701990,16702054..16702418); ID=FBpp0099907; name=ppk28-PB; parent=FBgn0030795,FBtr0100474; dbxref=FlyBase_Annotation_IDs:CG4805-PB,FlyBase:FBpp0099907,GB_protein:AAX52502.1,REFSEQ:NP_001014748,GB_protein:AAX52502; MD5=14974804b24ef237bdd65a71f1a87b83; length=632; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Pickpocket 28 long form OS=Drosophila melanogaster GN=ppk28 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 632 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: sodium ion transport [IEA]
    Molecular Function: sodium channel activity [IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLTESRRR QSGSSGCKKD SESDDDENTI CSRAAIKRSV VYYLKNSTLH GLKYIAEESI  60
   61 TIPERYVSKV AESISLSQRS RTNSYFISPF SIFFGLAFVL VVILSVFFIS NVYVKWSASP 120
  121 IIISTSAKQK LTSNMPFPAI TICNLNQALL SKVDRIGRTS TNFSLLMGLC DQGGDTTISY 180
  181 IGTWKYFKAI LVDVAQPCEK MLLYCSFGSR EEDCSWLFTS ILTDDGLCCN FNALHPSYLI 240
  241 RNYSDDVRLE TAHPNTRYEL IDWTPEKGYA RNLPEFYFPR TSGGTGIRMG LTVVLNASIA 300
  301 EYYCTKSMSV GFKVLVHNPA ELPKVSNYGF VVTAGREARI PIEPVYEDAL PTIRSIKKSV 360
  361 RRCLFSDEND LAYYRTYSRK NCELECEAKL LLRECSCVLY YLPRIDPLAR VCGPNDNQCT 420
  421 DRVQTEIESS LTNLSCENCW PGCFELTYRA TLSTASIVSD PRFQAGENLP EYIFHGPYSN 480
  481 ASEISILHFY YMTNIFRSTT KSEMFGFTEF LSNTGGLLGL FMGFSIFSVI EIFFYITVRP 540
  541 YCASRTLRQR HKRRLEQLSW LTPIRMPVRR ALRRNRGGLL RNPPPPAYSD LQKFRGKLDK 600
  601 PETCKRKLWR TLQVRPVVDR ADEELPTYPY LD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..561] PSI-BLAST 94.0 No description for 2qtsA was found.
    2 View Details [562..632] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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