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Protein Overview: gi|6782249, gi|4...

General Information:
Name(s) found: gi|6782249 [NCBI NR]
gi|42571073 [NCBI NR]
Description(s) found:
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  • gi|6782249|emb|CAB70599.1| E2F-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42571073|ref|NP_973610.1| E2F3 (E2F TRANSCRIPTION FACTOR 3); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • E2F-like protein [Arabidopsis thaliana]gi|42571073|ref|NP_973610.1| E2F transcription factor-3 (E2F3) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 E2F transcription factor-3 (E2F3) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATE2FA, E2F3 | E2F3 (E2F TRANSCRIPTION FACTOR-3) | chr2:15126767-15129972 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • E2F-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • E2F3 (E2F TRANSCRIPTION FACTOR-3) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: E2F3, ATE2FA | E2F transcription factor 3 | chr2:15119688-15122893 FORWARD LENGTH=514 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • E2F transcription factor 3 OS=Arabidopsis thaliana GN=E2F3 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q9FNY0, E2F transcription factor 3 OS=Arabidopsis thaliana GN=E2F3 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: transcription factor complex [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: DNA binding [IDA]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF  60
   61 NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPIFPSEIGL EIRGCFGDFD CYLLLLSLIQ 120
  121 KLRSVRLSSI RVNFCRLFSF AMSRKRKATM DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG 180
  181 GRVNIKSKAK GNKSTPQTPI STNAVRSFYE ISFMSRVTSL LTKKFVNLIK QAKDGMLDLN 240
  241 KAAETLEVQK RRIYDITNVL EGIDLIEKPF KNRILWKGVD ACPGDEDADV SVLQLQAEIE 300
  301 NLALEEQALD NQIRWLFVTE EDIKSLPGFQ NQTLIAVKAP HGTTLEVPDP DEAADHPQRR 360
  361 YRIILRSTMG PIDVYLVSEF EGKFEDTNGS GAAPPACLPI ASSSGSTGHH DIEALTVDNP 420
  421 ETAIVSHDHP HPQPGDTSDL NYLQEQVGGM LKITPSDVEN DESDYWLLSN AEISMTDIWK 480
  481 TDSGIDWDYG IADVSTPPPG MGEIAPTAVD STPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] MSA 2.022994 View MSA. No confident structure predictions are available.
    2 View Details [83..161] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [162..286] PSI-BLAST 23.69897 Cell cycle transcription factor E2F-4
    4 View Details [287..381] PSI-BLAST 12.69897 Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer
    5 View Details [382..514] MSA 1.097993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle