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Protein Overview: TBCD_ARATH

General Information:
Name(s) found: TBCD_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Tubulin-folding cofactor D OS=Arabidopsis thaliana GN=TFCD PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1254 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tubulin complex assembly [ISS]
    embryonic development ending in seed dormancy [IMP]
    cytokinesis [IGI]
    protein folding [ISS]
    microtubule-based process [IMP]
    Molecular Function: tubulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRAEEMSP TKIEIETAVK IEEEEDDEHD SKERVLQRYF LQEWKLVKSL LDDIVSNGRV  60
   61 VDPTSVHKIR SIMDKYQEQG QLVEPYLESI VSPLMFIIRS KTVDLEAKPD EILEIIKPIS 120
  121 IIIYALVTVC GYKAVIKFFP HQVSDLELAV LLLEKCHSTN SVSALRQEST GEMEAKCVTL 180
  181 LWLSILVLVP FDISSVDTSI ADDKTFGVDD LAPLVLKILG FCKDYLCSAG PMRRISGLLL 240
  241 SKLLTRPDMG KAFSSFFEWT YEVLSCKEDS VTNHFRLLGV MEALSAIFKT ASRKVLLDVL 300
  301 PIVLNDVTVL SKSNAAAKSS LLRKYLIKLT QRIGLVCLPH RSPSWRYVAQ TASLSENMST 360
  361 SSSQRLAPDH TVTAILQPES LDDQEDEDMD VPEILEEIIE MLLSGLRDTD TVVRWSAAKG 420
  421 IGRVTSRLTS VLSDEVLSSV LELFSPGEGD GSWHGGCLAL AELARRGLLL PRSFPLVVPV 480
  481 IVKALHYDVR RGPHSVGSHV RDAAAYVCWA FGRAYSHKDM KNVLDQLAPD LLIVGSFDRE 540
  541 VNCRRAAAAA FQENVGRQGN YPHGIDIVSI ADYFSLSSRV NSYLQVAVSI AQYEGYLYPF 600
  601 VDELLYNKIC HWDKSLRELA AEALAPLVKY EPKHFANYVL EKLIPCTLST DLCMRHGATL 660
  661 AAGEVVLALH QCGYVLSADS QKRMAGIVPS IEKARLYRGK GGEIMRLAVS RFIECISLSH 720
  721 VTLAERTERI LLDTLTENLR HPNSQIQNAA VSAVKQLVQS YLVGNDKKSV DLILKHLKHL 780
  781 TDPNVAVRRG SALALGVLPY ELLTAKWKDI VLKLCSACKI EVNPEDRDAE ARVNAVKGLT 840
  841 SVCETLTQKR ASDPGNDDLS LFLLIKTEVM DTLLKALDDY SVDNRGDVGS WVREAAVHGL 900
  901 EKCTYILCKK METYSEGDYN DDTSSLFDSN LATRLIGGML KQGVEKMDKL RETAAKVLQR 960
  961 ILYHKSVSVP HVPYREKLEE ILPNKANLQW AVPAFSFPRF VQLLKLRCYS KEVMSGLVIS1020
 1021 IGGLQDSLRK ASLVALLEYM REGEAKDPKE QQSRESALGD DILWILQEYK KCDRVMVPCL1080
 1081 QTIEILFSSK IFLNQESYTF SFYAGVMDSL AIELRASKDF TKLKAGLAIL GYIASVSHFI1140
 1141 STKAFSQLLS FLGHRYPMIR KAAAEQVYLA LLQNGILVTE EKMEKVIEII SESCWEADME1200
 1201 TTKTQRLELC ELAGLDHEVV FKTRNRLVIK DIAGNKSAAD ENASYSSLVD SSGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] PSI-BLAST 67.39794 Crystal Structure of The Cand1-Cul1-Roc1 Complex
    2 View Details [212..1254] PSI-BLAST 83.0 No description for 2h4mA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle