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Protein Overview: gi|30692913, gi|...

General Information:
Name(s) found: gi|30692913 [NCBI NR]
gi|13568392 [NCBI NR]
Description(s) found:
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  • gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] [NCBI NR]
  • gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana] [NCBI NR]
  • translation releasing factor2 [Arabidopsis thaliana]gi|30692913|ref|NP_851097.1| peptide chain release factor, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Peptide chain release factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPRFB, HCF109 | HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor | chr5:14253313-14255204 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • translation releasing factor2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HCF109, ATPRFB | high chlorophyll fluorescent 109 | chr5:14236083-14237974 REVERSE LENGTH=455 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • High chlorophyll fluorescent 109 protein OS=Arabidopsis thaliana GN=rf2 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q9LVY0, Isoform 2 of Peptide chain release factor PrfB1, chloroplastic OS=Arabidopsis thaliana GN=PRFB1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: translation release factor activity [IEA]
    translation release factor activity, codon specific [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMELTVLGP LAGRSFAIAG KPKLLLLRPT NLPLLRLSLP LSLPNFSSSS RFNSPIFAAQ  60
   61 ESNLSVSNEN ETSEWLMQDF YTLRKDVEIA SARVEEIRAS ANLQQLEQEI TNLESKATDT 120
  121 SFWDDRTKAQ ETLSSLNDLK DRMRLLSEFK TMVEDAETIV KLTEEMDSTD VSLLEEAMGI 180
  181 IKELNKSLDK FELTQLLSGP YDKEGAVVYI TAGAGGTDAQ DWADMLLRMY MRWGEKQRYK 240
  241 TKVVEMSNGE EAGIKSATLE IEGRYAYGYI SGEKGTHRIV RQSPFNSKGL RQTSFSGVEV 300
  301 MPLLPEEAVG IEIPEEDLDI SFTRAGGKGG QNVNKVETAV RITHIPTGVA VRCTEERSQL 360
  361 ANKTRALIRL KAKLMVIAEE QRATEIKEIR GDAVKAEWGQ QIRNYVFHPY KLVKDVRTGH 420
  421 ETSDITSVMD GDLDPFIKAY LKHKYTLAMA SAVTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] MSA 23.460996 View MSA. No confident structure predictions are available.
    2 View Details [77..455] PSI-BLAST 116.0 70S ribosome functional complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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