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Protein Overview: AB1D_ARATH

General Information:
Name(s) found: AB1D_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1337 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: positive regulation of seed germination [IMP]
    fatty acid beta-oxidation [IMP]
    fatty acyl coenzyme A transport [IMP]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLQLLQLT ERGRGLVASR RKSILLAAGI VAAGGTAVYL KSRVASRRPD SSRLCNGQSD  60
   61 DDETLEKLTA TDQNAKITTK KKKGGGLKSL QVLTAILLSQ MGKMGARDLL ALVATVVFRT 120
  121 ALSNRLAKVQ GFLFRAAFLR RAPLFLRLIS ENIMLCFMLS TLHSTSKYIT GALSLRFRKI 180
  181 LTKIIHSHYF ENMVYYKISH VDGRITHPEQ RIASDVPRFS SELSDLILDD LTAVTDGILY 240
  241 AWRLCSYASP KYIFWILAYV LGAGTAIRNF SPSFGKLMSK EQQLEGEYRQ LHSRLRTHSE 300
  301 SIAFYGGETR EESHIQQKFK NLVSHMSHVL HDHWWFGMIQ DFLLKYLGAT VAVILIIEPF 360
  361 FSGHLRPDDS TLGRAEMLSN IRYHTSVIIS LFQALGTLSI SSRRLNRLSG YADRIHELMA 420
  421 VSRELSGDDK SSFQRNRSRN YLSEANYVEF SDVKVVTPTG NVLVEDLTLR VEQGSNLLIT 480
  481 GPNGSGKSSL FRVLGGLWPL VSGHIVKPGV GSDLNKEIFY VPQRPYMAVG TLRDQLIYPL 540
  541 TSGQESELLT EIGMVELLKN VDLEYLLDRY QPEKEVNWGD ELSLGEQQRL GMARLFYHKP 600
  601 KFAILDECTS AVTTDMEERF AAKVRAMGTS CITISHRPAL VAFHDVVLSL DGEGGWSVHY 660
  661 KRDDSALLTD AEIDSVKSSD TDRQNDAMVV QRAFAAARKE SATNSKAQSY QTQLIARSPV 720
  721 VDKSVVLPRF PQPQTSQRAL PSRVAAMLNV LIPTIFDKQG AQLLAVACLV VSRTLISDRI 780
  781 ASLNGTTVKY VLEQDKAAFV RLIGLSVLQS GASSIIAPSL RHLTQRLALG WRIRLTQHLL 840
  841 RNYLRNNAFY KVFHMSGNSI DADQRLTRDL EKLTADLSGL LTGMVKPSVD ILWFTWRMKL 900
  901 LTGQRGVAIL YTYMLLGLGF LRRVAPDFGD LAGEEQQLEG KFRFMHERLN THAESIAFFG 960
  961 GGAREKAMVD KKFRALLDHS LMLLRKKWLY GILDDFVTKQ LPNNVTWGLS LLYALEHKGD1020
 1021 RALVSTQGEL AHALRYLASV VSQSFMAFGD ILELHKKFLE LSGGINRIFE LDEFLDASQS1080
 1081 GVTSENQTSR LDSQDLLSFS EVDIITPAQK LMASKLSCEI VSGKSLLVTG PNGSGKTSVF1140
 1141 RVLRDIWPTV CGRLTKPSLD IKELGSGNGM FFVPQRPYTC LGTLRDQIIY PLSKEEAEKR1200
 1201 AAKLYTSGES STEAGSILDS HLKTILENVR LVYLLERDVG GWDATTNWED ILSLGEQQRL1260
 1261 GMARLFFHRP KFGVLDECTN ATSVDVEEQL YRVARDMGVT FITSSQRPAL IPFHSLELRL1320
 1321 IDGEGNWELR SIEQTTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] MSA 1.593993 View MSA. No confident structure predictions are available.
    2 View Details [141..445] deduced N/A No confident structure predictions are available.
    3 View Details [446..698] PSI-BLAST 61.221849 No description for 2cbzA was found.
    4 View Details [699..1337] PSI-BLAST 136.0 No description for 2hydA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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