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Protein Overview: TOP6B_ARATH

General Information:
Name(s) found: TOP6B_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • DNA topoisomerase 6 subunit B OS=Arabidopsis thaliana GN=TOP6B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 670 amino acids

    Gene Ontology:
    Cellular Component: DNA topoisomerase complex (ATP-hydrolyzing) [ISS]
    Biological Process: DNA endoreduplication [IMP]
    pattern specification process [IMP]
    response to brassinosteroid stimulus [IMP]
    trichome differentiation [IMP]
    Molecular Function: identical protein binding [IPI]
    protein binding [IPI]
    DNA topoisomerase (ATP-hydrolyzing) activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDDLVETK KGSSKNSKDS NESKLKQKSP AEFFAENKNI AGFDNPGKSL YTTVRELVEN  60
   61 ALDSAESISE LPEVEVTIEE IVKSKFNSMI GLIDRERVDT QLYDDYETEK ARGKRLAKEA 120
  121 RASEIQAKNL ASGKKNKEPG VSKVLKARGE ASYYKVTCKD NGKGMPHDDI PNMFGRVLSG 180
  181 TKYGLKQTRG KFGLGAKMAL IWSKMSTGLP IEISSSMKSQ NYVTFCRLDI DIHRNIPHIH 240
  241 LHEKKGNKEK WHGAEIQVVI EGNWTTYRSK ILHYMRQMAV ITPYAQFLFR FISETPEKNV 300
  301 TIKFTRRTDV MPPIPIETKH HPSSVDLLLI KRLITDTSKK TLLQFLQNEF VNINKTLAAR 360
  361 LIGEMGPDFG PSMAVKSVTS QQMVRIHQLF RQAKFDDPSG DCLSPAGEYN LRLGIIKELH 420
  421 PDMVATYSGS AQVFEGHPFI VEAGVSLGGR DVKQGINIFR FANRIPLLFE QGADVVTRTA 480
  481 LKRINWNSYK INQTQDKIGV FVSIVSTKIP FKGTGKEYIG DDISEIATAV KSAIQQCCIQ 540
  541 LKSKIVKRLQ AREQQERKRS LSRYIPDATG AVYEVLKQMT EEHKTKRKRY GEEDIVMLDK 600
  601 VSKQIITKET LKEKLAEHVE QVDYEMALEY ATQSGVSEEP RENIYLQHLD PNKSNFIDLH 660
  661 SPTFVFRLML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] PSI-BLAST 50.69897 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
    2 View Details [96..670] PSI-BLAST 123.0 No description for 2q2eB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle