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Protein Overview: gi|110735805, gi...

General Information:
Name(s) found: gi|28416635 [NCBI NR]
gi|18412511 [NCBI NR]
gi|110735805 [NCBI NR]
Description(s) found:
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  • gi|28416635|gb|AAO42848.1| At1g79790 [Arabidopsis thaliana] [NCBI NR]
  • gi|18412511|ref|NP_565221.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110735805|dbj|BAE99879.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • At1g79790 [Arabidopsis thaliana]gi|18412511|ref|NP_565221.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Haloacid dehalogenase-like hydrolase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr1:30021880-30023079 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • catalytic/ hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g79790 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:30016987-30018186 REVERSE LENGTH=245 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g79790 OS=Arabidopsis thaliana GN=At1g79790 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAMHTSA EFINLKPNMW KKNPVRASGS CCLGSSSGDE ISRKRKLPIL LFDVMDTIVR  60
   61 DPFYQDVPAF FGMPMKQLLE CKHPMVWIEF EKGLIDEEEL ARNFFIDGRD FDLEGLKECM 120
  121 RSGYSYLDGM QELLQTLAAD DFEIHAFTNY PIWYNIIEDK LKLSAYLSWT FCSCIAGKRK 180
  181 PDPEFYLEVV GHLGVEPCDC IFIDDRPTNV KCAIEIGMGG LCFENADSLA KDLSDLGINV 240
  241 SVPKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 34.522879 No description for 2hszA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.02290994020378 bayes_pls_golite062009
  • hydrolase activity
    		•  0.71914501009647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle