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Protein Overview: gi|27754520, gi|...

General Information:
Name(s) found: gi|30689328 [NCBI NR]
gi|28393991 [NCBI NR]
gi|27754520 [NCBI NR]
Description(s) found:
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  • gi|30689328|ref|NP_181857.2| far-red impaired responsive family protein / FAR1 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393991|gb|AAO42403.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27754520|gb|AAO22707.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|27754520|gb|AAO22707.1| unknown protein [Arabidopsis thaliana]gi|30689328|ref|NP_181857.2| far-red impaired responsive family protein / FAR1 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Far-red impaired responsive family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | far-red impaired responsive family protein / FAR1 family protein | chr2:17996816-17997938 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Far-red impaired responsive (FAR1) family protein | chr2:17989739-17990861 FORWARD LENGTH=206 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Far-red impaired responsive 1-like protein OS=Arabidopsis thaliana GN=At2g43280 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to red or far red light [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDEDDPTTK NSNNTDDFAI EPREGIIFES EDAAKMFYDD YSRRLGFVMR VMSCRRSEKD  60
   61 GRILARRFGC NKEGHCVSIR GKFGSVRKPR PSTREGCKAM IHVKYDRSGK WVITKFVKEH 120
  121 NHPLVVSPRE ARHTLDEKDK RIQELTIELR NKKRLCAAYK EQLDAFAKIV EEHSNQIAKK 180
  181 VENVVNNLKE FEHLEHALLR SKQDAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] Pfam 34.167491 No description for PF03101.6 was found. No confident structure predictions are available.
    2 View Details [126..206] MSA 4.157997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle