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Protein Overview: BRX_ARATH

General Information:
Name(s) found: BRX_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30692614|ref|NP_174471.2| BRX (BREVIS RADIX); identical protein binding / water channel [Arabidopsis thaliana] [NCBI NR]
  • gi|28393953|gb|AAO42384.1| putative major intrinsic protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27754447|gb|AAO22671.1| putative major intrinsic protein [Arabidopsis thaliana] [NCBI NR]
  • gi|229621711|sp|Q17TI5.2|BRX_ARATH RecName: Full=Protein BREVIS RADIX; Short=AtBRX [NCBI NR]
  • Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2 [Swiss-Prot]
  • putative major intrinsic protein [Arabidopsis thaliana]gi|27754447|gb|AAO22671.1| putative major intrinsic protein [Arabidopsis thaliana]gi|30692614|ref|NP_174471.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: NIP3;1, NLM9, BRX | BRX/NIP3;1/NLM9 (BREVIS RADIX); identical protein binding / water channel | chr1:11447784-11450033 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • water channel [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative major intrinsic protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: NLM9, BRX | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein | chr1:11447804-11450053 FORWARD LENGTH=344 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: root development [IMP]
    response to abscisic acid stimulus [IMP]
    cytokinin mediated signaling pathway [IMP]
    auxin mediated signaling pathway [IMP]
    lateral root development [IMP]
    Molecular Function: identical protein binding [IPI]
    water channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSCIACTKA DGGEEVEHGA RGGTTPNTKE AVKSLTIQIK DMALKFSGAY KQCKPCTGSS  60
   61 SSPLKKGHRS FPDYDNASEG VPYPFMGGSA GSTPAWDFTN SSHHPAGRLE SKFTSIYGND 120
  121 RESISAQSCD VVLDDDGPKE WMAQVEPGVH ITFASLPTGG NDLKRIRFSR EMFDKWQAQR 180
  181 WWGENYDKIV ELYNVQRFNR QALQTPARSD DQSQRDSTYS KMDSARESKD WTPRHNFRPP 240
  241 GSVPHHFYGG SSNYGPGSYH GGPPMDAART TTSSRDDPPS MSNASEMQAE WIEEDEPGVY 300
  301 ITIRQLSDGT RELRRVRFSR ERFGEVHAKT WWEQNRERIQ TQYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] MSA 5.039979 View MSA. No confident structure predictions are available.
    2 View Details [174..344] MSA 6.040973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle