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Protein Overview: gi|28393927, gi|...

General Information:
Name(s) found: gi|30678637 [NCBI NR]
gi|28393927 [NCBI NR]
gi|27754619 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|30678637|ref|NP_191952.2| double-stranded RNA-binding domain (DsRBD)-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393927|gb|AAO42371.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27754619|gb|AAO22755.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [IEA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA]
    double-stranded RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPPPESSS NPISSFSVAQ KRMLLQRCES KFKIRKLNDT VEEDNVTQME PNFTLENTLV  60
   61 SEPEADLRPH TTEPTTEETQ RSSAKSQLYN LCSVRHWKAP LYEYIAEGPC HMKIFTGKVT 120
  121 VEMKEDSRIT VLECFGNPQY KKKIAAEQAA EAALWYLKNV GYTLQTEKAS GRKGRSKPIS 180
  181 KMMVTGEPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 16.0 Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.602312874472495 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle