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Protein Overview: GOGC3_ARATH

General Information:
Name(s) found: GOGC3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75148817|sp|Q84WU4.1|GOGC3_ARATH RecName: Full=Golgin candidate 3; Short=AtGC3; AltName: Full=GRIP-related ARF-binding domain-containing Arabidopsis protein 1 [NCBI NR]
  • gi|30695441|ref|NP_191716.2| GDAP1 (GRIP-RELATED ARF-BINDING DOMAIN-CONTAINING ARABIDOPSIS PROTEIN 1); protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|27754263|gb|AAO22585.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|164708710|gb|ABY67252.1| GDAP1/GC3 [Arabidopsis thaliana] [NCBI NR]
  • gi|110741764|dbj|BAE98827.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Golgin candidate 3 OS=Arabidopsis thaliana GN=GC3 PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|30695441|ref|NP_191716.2| intracellular protein transport protein USO1-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Intracellular protein transport protein USO1-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GC3, GDAP1 | GC3/GDAP1 (GRIP-RELATED ARF-BINDING DOMAIN-CONTAINING ARABIDOPSIS PROTEIN 1); oxidoreductase/ transition metal ion binding | chr3:22790612-22794617 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GC3, GDAP1 | GRIP-related ARF-binding domain-containing protein 1 | chr3:22779637-22783642 REVERSE LENGTH=712 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 712 amino acids

    Gene Ontology:
    Cellular Component: Golgi apparatus [IDA]
    Biological Process: Golgi organization [ISS]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSSIENMKA NLHKIVLDVH EDDEEEDDLH KYGSANGVSN SDRRNSSGFR SVSRYSISNG  60
   61 IESPAHHEIE RYKAEIKKLQ ESESDIKALS VNYAALLREK EDQISRLNQE NGSLKQNLTS 120
  121 TSAALKEART DISRGSNNYA IKGNNDQSPN RLHKSVSHLK SPNHMSNGKG KDTDSFIKEK 180
  181 DLADMLEDRT KSMAAVQATE LAKEREKLRD FQLSLQEERK RSESFKEELE SMRLDKNKTS 240
  241 MEISKMRSEL DAKLLEIKHL QMKLTGQESH AIGPGMEHLK EVNKALEKEN NELKLKRSEL 300
  301 EAALEESRKL TNSKVFPDAT ESLTRHPSTL DKEKPESFPG KEEMEQSLQR LEMDLKETQR 360
  361 ERDKARQELK RLKQHLLEKE TEESEKMDED SRLIEELRQT NEYQRSQISH LEKSLKQAIS 420
  421 NQEDNRLSND NQIRKLKDTV DDLNQKLTNC LRTIESKNVE LLNLQTALGQ YYAEIEAKEH 480
  481 FERELAMAKD ELMKLSARLK DSDERLESSN KEKEDVTSKL LHAEKVAAEW KNRVTKVEED 540
  541 NAKVRRVLEQ SMTRLNRMSM ESDYLVDRRI VIKLLVTYFQ KNHNKEVLDL MVRMLGFSEE 600
  601 DKERIGAAKQ GGGKGVVRGV LGFPGRFVGG ILGGKSAELH ANAASDNQSF ADLWVDFLLK 660
  661 DAEERERREA EEAAASKAKQ DSERTRQEAA LHDSEFSTVP LRSSESNQRL SR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] PSI-BLAST 19.522879 Heavy meromyosin subfragment
    2 View Details [347..634] PSI-BLAST 10.69897 Tropomyosin
    3 View Details [635..712] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle