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Protein Overview: PPME1_ARATH

General Information:
Name(s) found: PPME1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75148774|sp|Q84WM7.1|PPME1_ARATH RecName: Full=Pectinesterase PPME1; Short=PE PPME1; Short=AtPPME1; AltName: Full=Pectin methylesterase PPME1; AltName: Full=Pectin methylesterase 9; Short=AtPME9; AltName: Full=Protein POLLEN SPECIFIC PME 1; Flags: Prec [NCBI NR]
  • gi|30697951|ref|NP_177152.2| PPME1; pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|27754715|gb|AAO22801.1| putative pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1 [Swiss-Prot]
  • putative pectinesterase [Arabidopsis thaliana]gi|30697951|ref|NP_177152.2| pectinesterase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pectinesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPPME1 | ATPPME1; pectinesterase | chr1:26347212-26348634 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATPPME1, PPME1 | Pectin lyase-like superfamily protein | chr1:26343549-26344971 REVERSE LENGTH=361 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [NAS]
    Golgi apparatus [NAS]
    plant-type cell wall [IDA][ISS]
    Biological Process: pollen tube growth [IDA][IMP]
    Molecular Function: pectinesterase activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYTNVSILL GLLMVFVTPM VFADDVTPIP EGKPQVAQWF NANVGPLAQR KGLDPALVAA  60
   61 EAAPRIINVN PKGGEFKTLT DAIKSVPAGN TKRVIIKMAP GEYKEKVTID RNKPFITLMG 120
  121 QPNAMPVITY DGTAAKYGTV DSASLIILSD YFMAVNIVVK NTAPAPDGKT KGAQALSMRI 180
  181 SGNFAAFYNC KFYGFQDTIC DDTGNHFFKD CYVEGTFDFI FGSGTSMYLG TQLHVVGDGI 240
  241 RVIAAHAGKS AEEKSGYSFV HCKVTGTGGG IYLGRAWMSH PKVVYAYTEM TSVVNPTGWQ 300
  301 ENKTPAHDKT VFYGEYKCSG PGSHKAKRVP FTQDIDDKEA NRFLSLGYIQ GSKWLLPPPA 360
  361 L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 85.221849 Pectin methylesterase PemA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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