Protein Overview: NFYB6_ARATH

General Information:
Name(s) found:	NFYB6_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81174956\|sp\|Q84W66.2\|NFYB6_ARATH RecName: Full=Nuclear transcription factor Y subunit B-6; Short=AtNF-YB-6; AltName: Full=Protein LEAFY COTYLEDON 1-LIKE [NCBI NR] gi\|30695265\|ref\|NP_199578.2\| NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6); transcription activator/ transcription activator binding / transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|27372447\|gb\|AAN15924.1\| leafy cotyledon 1-like L1L protein [Arabidopsis thaliana] [NCBI NR] Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2 [Swiss-Prot] leafy cotyledon 1-like L1L protein [Arabidopsis thaliana]gi\|30695265\|ref\|NP_199578.2\| CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Splice Isoform 1 of Nuclear transcription factor Y subunit B-6 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) \| chr5:19332287-19333201 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] Nuclear transcription factor Y subunit B-6 (AtNF-YB-6) (Protein LEAFY COTYLEDON 1-LIKE) [nr-271106-contam.fasta] transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] leafy cotyledon 1-like L1L protein [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: NF-YB6, L1L \| nuclear factor Y, subunit B6 \| chr5:19315061-19315975 FORWARD LENGTH=234 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	234 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] intracellular [IEA]
Biological Process:	positive regulation of gene-specific transcription [IDA] regulation of transcription [TAS]
Molecular Function:	transcription factor activity [ISS] transcription activator activity [IDA] transcription activator binding [IPI]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGGFHGYR KLSVNNTTPS PPGLAANFLM AEGSMRPPEF NQPNKTSNGG EEECTVREQD  60
   61 RFMPIANVIR IMRRILPAHA KISDDSKETI QECVSEYISF ITGEANERCQ REQRKTITAE 120
  121 DVLWAMSKLG FDDYIEPLTL YLHRYRELEG ERGVSCSAGS VSMTNGLVVK RPNGTMTEYG 180
  181 AYGPVPGIHM AQYHYRHQNG FVFSGNEPNS KMSGSSSGAS GARVEVFPTQ QHKY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..153]	PSI-BLAST	31.69897	Nuclear transcription factor Y subunit beta (Nf-Yb3)
2	View Details	[154..234]	deduced	N/A	No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Protein Overview: NFYB6_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: