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Protein Overview: gi|19698373, gi|...

General Information:
Name(s) found: gi|30693411 [NCBI NR]
gi|19698373 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30693411|ref|NP_850958.1| HCS2 (holocarboxylase synthetase 2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic [Arabidopsis thaliana] [NCBI NR]
  • gi|19698373|gb|AAL93112.1|AF414941_1 holocarboxylase synthetase hcs2.d [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: catalytic activity [IEA]
    biotin-[acetyl-CoA-carboxylase] ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIDASCSLV LYGKSSVETD TATRLKNNNV LKLPDNSKVS IFLQSEIKNL VRDDDSSFNL  60
   61 SLFMNSISTH RFGRFLIWSP YLSSTHDVVS HNFSEIPVGS VCVSDIQLKG RGRTKNVWES 120
  121 PKGCLMYSFT LEMEDGRVVP LIQYVVSLAV TEAVKDVCDK KGLSYNDVKI KWPNDLYLNG 180
  181 LKIGGILCTS TYRSRKFLVS VGVGLNVDNE QPTTCLNAVL KDVCPPSNLL KREEILGAFF 240
  241 KKFENFFDLF MEQGFKSLEE LYYRTWLHSG QRVIAEEKNE DQVVQNVVTI QLLEMTM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 64.221849 THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46366406733797 bayes_pls_golite062009
  • ligase activity
    		•  1.22215897446525 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.92307591122679 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.92307591122679 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.92307153294189 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle