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Protein Overview: gi|79383745, gi|...

General Information:
Name(s) found: gi|79383745 [NCBI NR]
gi|47550675 [NCBI NR]
gi|110741647 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|79383745|ref|NP_177879.3| protein binding / tubulin-tyrosine ligase [Arabidopsis thaliana] [NCBI NR]
  • gi|47550675|gb|AAT35236.1| At1g77550 [Arabidopsis thaliana] [NCBI NR]
  • gi|110741647|dbj|BAE98770.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 855 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: protein modification process [IEA][ISS]
    Molecular Function: protein binding [ISS]
    tubulin-tyrosine ligase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIESFDDF VKVHGILLAA SGLPPKLYPR LFEKLAYDTF DGGDYFQIES CEDDQRRKLL  60
   61 LTAESMPKDS DVFLVDHAWT FRLPDAYKQL KEIPGLAERM ASLMSVDIDV DAGEEEVAEE 120
  121 LSVDQIIDNE IRYAADKGYD SLRWLELEGL GVDDSLLSLH LPSKFQDLVA LSLIGNKIES 180
  181 ADVVIQEIVK FKNLKALWLN DNPVLQKSER QMADEILQGC PSLEIYNSCF TPNYGLWALG 240
  241 FCGDIFGKDN PGCVQQDQPL CNVTSLDLSN RSIHNLVNKA FSVHEMPLLS HLNIRGNSLD 300
  301 QNSVGELLEV LKLFPSLSSL EVDIPGPLGI NALEILESLS NLSLLNGVDT AKILETGKHV 360
  361 VDSMLQPRIP ELNPDDTLVD RVLDAMWLYA LNYRLADDEK LDETSLWYVM DELGSALRHS 420
  421 DEPNFKVAPF LFMPSGKLES AVSYSVMWPI KHSQKGDECT RDFLSGIGED KQRSARLTAW 480
  481 FQTPENYFIH EFEKYQQKLQ AKAFESKPSN PSVSRSIQHS DGSPLLVYTD LPQVEEFLTR 540
  541 PEFVITNEPK DADILWTSVQ VDDELKKEVG ITDDQYINQF PFEACLVMKH HLAETIQMGY 600
  601 GSPKWLQPTY NLETQLSQFI GDYCVRKRDQ LNNLWILKPW NMARTIDTSI TDNLSAIIRM 660
  661 METGPKICQK YIEHPALFKG NKFDLRYVVL VRSIDPLEIY LIEIFWVRLS NNPYSLEKHS 720
  721 FFEYETHFTV MNYGRKLNHK PTAEFVREFE QEHNVKWMDI HEKVKQVIRA VFEAAALAHP 780
  781 EMQSPKSRAM YGVDVMLDSS FEPKILEVTY CPDCMRACKY DMETIDGKGI VKGGDFFNNV 840
  841 FGCLFLDETA HVTPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..237] MSA 1.010971 View MSA. No confident structure predictions are available.
    2 View Details [238..449] deduced N/A No confident structure predictions are available.
    3 View Details [450..607] MSA 6.264994 View MSA. No confident structure predictions are available.
    4 View Details [608..780] MSA 3.28399 View MSA. No confident structure predictions are available.
    5 View Details [781..855] MSA 8.276996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle