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Protein Overview: UBC25_ARATH

General Information:
Name(s) found: UBC25_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75311600|sp|Q9LUQ5.1|UBC25_ARATH RecName: Full=Probable ubiquitin carrier protein E2 25 [NCBI NR]
  • gi|16323334|gb|AAL15380.1| AT3g15355/MJK13_1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15795100|dbj|BAB02364.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15229481|ref|NP_188154.1| UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase [Arabidopsis thaliana] [NCBI NR]
  • gi|13605651|gb|AAK32819.1|AF361806_1 AT3g15355/MJK13_1 [Arabidopsis thaliana] [NCBI NR]
  • Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1 [Swiss-Prot]
  • AT3g15355/MJK13_1 [Arabidopsis thaliana]gi|16323334|gb|AAL15380.1| AT3g15355/MJK13_1 [Arabidopsis thaliana]gi|15229481|ref|NP_188154.1| ubiquitin-conjugating enzyme-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin-conjugating enzyme-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: UBC25, PFU1 | PFU1/UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase | chr3:5183865-5186676 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g15355/MJK13_1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ubiquitin-like activating enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzyme 25 | chr3:5183858-5186669 FORWARD LENGTH=609 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 609 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of protein metabolic process [IEA]
    post-translational protein modification [IEA]
    Molecular Function: small conjugating protein ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF  60
   61 DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES LIYEDDENYS EQYDFEMEAE 120
  121 PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI 180
  181 HSQFSSDMET PVAQPWNALP HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL 240
  241 QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG 300
  301 LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR 360
  361 MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY HSGGLRINPN LYNCGKVCLS 420
  421 LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS 480
  481 ENTFILSLKT MVYTMRRPPK YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV 540
  541 EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR 600
  601 SKRDRVSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] MSA 2.05997 View MSA. No confident structure predictions are available.
    2 View Details [252..327] deduced N/A No confident structure predictions are available.
    3 View Details [328..528] PSI-BLAST 31.69897 No description for 2pwqA was found.
    4 View Details [529..609] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle