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Protein Overview: CTF77_ARATH

General Information:
Name(s) found: CTF77_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|26983802|gb|AAN86153.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22329636|ref|NP_173218.2| CSTF77; protein binding [Arabidopsis thaliana] [NCBI NR]
  • Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana GN=CSTF77 PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|22329636|ref|NP_173218.2| suppressor of forked protein family protein / SUF family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Suppressor of forked protein family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CSTF77, ATCSTF77 | ATCSTF77/CSTF77 (Cleavage stimulation factor 77); protein binding | chr1:6110201-6116264 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CSTF77, ATCSTF77 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:6110208-6116271 REVERSE LENGTH=734 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g17760 OS=Arabidopsis thaliana GN=CSTF77 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 734 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    intracellular [IEA]
    Biological Process: RNA 3'-end processing [IMP]
    mRNA processing [ISS]
    Molecular Function: protein binding [IPI]
    mRNA binding [IDA]
    transcription repressor activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKYIVEEA EALAKRALHS PIAQATPIYE QLLSLYPTSA RFWKQYVEAQ MAVNNDDATK  60
   61 QIFSRCLLTC LQVPLWQCYI RFIRKVYDKK GAEGQEETTK AFEFMLNYIG TDIASGPIWT 120
  121 EYIAFLKSLP ALNLNEDLHR KTALRKVYHR AILTPTHHVE QLWKDYENFE NTVNRQLAKG 180
  181 LVNEYQPKFN SARAVYRERK KYIEEIDWNM LAVPPTGTSK EETQWVAWKK FLSFEKGNPQ 240
  241 RIDTASSTKR IIYAYEQCLM CLYHYPDVWY DYAEWHVKSG STDAAIKVFQ RALKAIPDSE 300
  301 MLKYAFAEME ESRGAIQSAK KLYENILGAS TNSLAHIQYL RFLRRAEGVE AARKYFLDAR 360
  361 KSPSCTYHVY IAFATMAFCI DKEPKVAHNI FEEGLKLYMS EPVYILKYAD FLTRLNDDRN 420
  421 IRALFERALS TLPVEDSAEV WKRFIQFEQT YGDLASILKV EQRMKEALSG KGEEGSSPPE 480
  481 SSLQDVVSRY SYMDLWPCTS NDLDHLARQE LLVKNLNKKA GKTNLPHVPA AIGSVASSSK 540
  541 VVYPDTSQMV VQDPTKKSEF ASSANPVAAS ASNTFPSTVT ATATHGSAST FDEIPKTTPP 600
  601 ALVAFLANLP IVDGPTPNVD VVLSICLQSD FPTGQTVKQS FAAKGNPPSQ NDPSGPTRGV 660
  661 SQRLPRDRRA TKRKDSDRQE EDDTATVQSQ PLPTDVFRLR QMRKARGIAT SSQTPTGSTS 720
  721 YGSAFSGELS GSTG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..497] PSI-BLAST 49.522879 No description for 2ooeA was found.
    2 View Details [498..593] deduced N/A No confident structure predictions are available.
    3 View Details [594..734] PSI-BLAST 7.0 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle