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Protein Overview: HLP_ARATH

General Information:
Name(s) found: HLP_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30694896|ref|NP_851140.1| ribosomal protein L14 family protein / huellenlos paralog (HLP) [Arabidopsis thaliana] [NCBI NR]
  • gi|18140860|gb|AAL60452.1|AF402993_1 HUELLENLOS PARALOG [Arabidopsis thaliana] [NCBI NR]
  • gi|16604452|gb|AAL24232.1| AT5g46160/MCL19_22 [Arabidopsis thaliana] [NCBI NR]
  • 50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana GN=HLP PE=2 SV=1 [Swiss-Prot]
  • HUELLENLOS PARALOG [Arabidopsis thaliana]gi|16604452|gb|AAL24232.1| AT5g46160/MCL19_22 [Arabidopsis thaliana]gi|30694896|ref|NP_851140.1| ribosomal protein L14 family protein / huellenlos paralog (HLP) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribosomal protein L14 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ribosomal protein L14 family protein / huellenlos paralog (HLP) | chr5:18728683-18729568 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g46160/MCL19_22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • HUELLENLOS PARALOG [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L14p/L23e family protein | chr5:18711456-18712341 REVERSE LENGTH=173 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g46160/MCL19_22 OS=Arabidopsis thaliana GN=HLP PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 173 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [IEA]
    ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAFASRLT RGGRSLLGGL NNGGSMNSSN GMMNESILSQ QQQRRTFIQM GTVLKVVDNS  60
   61 GAKKVMCIQA LKGKKGARLG DTIVASVKEA MPNGKVKKGA VVYGVVVRAA MQRGRVDGSE 120
  121 VRFDDNAVVL VDSKDKNTKT DRQPIGTRVF GPVPHELRKK KHLKILALAQ HVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 48.0 No description for 2j01O was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle