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Protein Overview: gi|52077288, gi|...

General Information:
Name(s) found: gi|52077288 [NCBI NR]
gi|115479771 [NCBI NR]
gi|113631712 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|52077288|dbj|BAD46330.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115479771|ref|NP_001063479.1| Os09g0479400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113631712|dbj|BAF25393.1| Os09g0479400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 575 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVALLSPA AAAAVVTEGE EKPPLEEVEV EVEVVVRAIV ADGDGREANA AAPGANWCGE  60
   61 EEVPAHAAEG GTVAAMVDEN AAAPAAEGDT VAAAKGEAPA AEGDMVVAAK GAAHAAAEGD 120
  121 TVAAAAVAGE NEAAHAPAAG GNTVAAAADV KGEALQAIPV ADEAAAVAEG VNAIAAAERE 180
  181 EDDEGVKWLK HYSSLQSILT VGDGDFSFSL ALATAFGSGD NLVATSLDTI EDLRGKYSKA 240
  241 ESNIMELKRM GATVLHGIDA KRMKDHTNLK LRRFDRIIFN FPHAGFKGKE DDLHMINLHR 300
  301 ELVWGFFQNA RHLLRPYGEI HVSHKIGLPY DRWCIEHLAY ESSLTMIAKV DFRKEDYPGY 360
  361 NQKRGDSAKC DQPFELGACC TFMFMRDLTR LKRARRNRIN ASSLGIQAQH DMPFHPRPLV 420
  421 PAYPQPHFPS QVNAAHRQVP PEHYPLGIAH GQEPGFLDNF GGIERYPYQR GAIGTVIGMP 480
  481 GTPSPMRGIT RSSFPAPQEQ PWRQERYIMD PEVRDDHYHF AREYPRNLQE YEMERQVMPG 540
  541 GTRLRYVDFL ENRYEESVRR QEHLRRLIAE YGGYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 20.69897 No description for 1y0fB was found.
    2 View Details [195..395] FFAS03 1.13 No description for 2fcaA was found.
    3 View Details [396..575] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.639646908254091 bayes_pls_golite062009
  • transferase activity
    		•  0.394707018913607 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0810339077201343 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0737551340470768 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle